14 homologs were found in PanDaTox collection
for query gene YpsIP31758_3829 on replicon NC_009708
Organism: Yersinia pseudotuberculosis IP 31758



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009708  YpsIP31758_3829  YscD/HrpQ family type III secretion apparatus protein  100 
 
 		 404 aa  821    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
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NC_010159  YpAngola_A3942  YscD/HrpQ family type III secretion apparatus protein  99.5 
 
 		 403 aa  811    Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
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NC_010465  YPK_3916  YscD/HrpQ family type III secretion apparatus protein  100 
 
 		 404 aa  821    Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_009997  Sbal195_2250  YscD/HrpQ family type III secretion apparatus protein  35.54 
 
 		 401 aa  216  4e-55  Shewanella baltica OS195  Bacteria  normal  0.123284  normal  0.0388601 
 
 
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NC_009052  Sbal_1947  YscD/HrpQ family type III secretion apparatus protein  35.29 
 
 		 401 aa  214  1.9999999999999998e-54  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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NC_011083  SeHA_C1529  type III secretion apparatus protein, YscD/HrpQ family  30.86 
 
 		 399 aa  205  9e-52  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.055163 
 
 
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NC_011080  SNSL254_A1507  type III secretion apparatus protein YscD/HrpQ family  30.62 
 
 		 399 aa  205  1e-51  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.574995  hitchhiker  0.00233459 
 
 
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NC_011149  SeAg_B1777  type III secretion apparatus protein, YscD/HrpQ family  31.34 
 
 		 399 aa  205  1e-51  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0349319  n/a   
 
 
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NC_011205  SeD_A1947  type III secretion apparatus protein, YscD/HrpQ family  30.62 
 
 		 399 aa  205  1e-51  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.389941 
 
 
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NC_011094  SeSA_A1492  type III secretion apparatus protein, YscD/HrpQ family  30.62 
 
 		 399 aa  203  4e-51  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.519632 
 
 
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NC_011353  ECH74115_5053  type III secretion apparatus protein, YscD/HrpQ family  25.91 
 
 		 406 aa  157  4e-37  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
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NC_013456  VEA_003338  type III secretion inner membrane protein YscD  22.17 
 
 		 433 aa  77.4  0.0000000000004  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
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NC_009783  VIBHAR_01701  hypothetical protein  21.23 
 
 		 433 aa  69.7  0.00000000009  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_010157  YpAngola_B0055  type III secretion apparatus protein YscD  23.21 
 
 		 419 aa  47.8  0.0003  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
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