13 homologs were found in PanDaTox collection
for query gene VEA_003383 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_003383  putative tricarboxylic transport TctB  100 
 
 
164 aa  323  5e-88  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02415  hypothetical protein  91.46 
 
 
164 aa  302  1.0000000000000001e-81  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0949  hypothetical protein  82.28 
 
 
165 aa  246  1e-64  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2191  membrane protein  72.84 
 
 
166 aa  230  8.000000000000001e-60  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1872  putative tricarboxylic transport TctB  69.8 
 
 
159 aa  215  2e-55  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0632285 
 
 
-
 
NC_009052  Sbal_3434  putative tricarboxylic transport membrane protein  42.58 
 
 
155 aa  106  2e-22  Shewanella baltica OS155  Bacteria  normal  0.63141  n/a   
 
 
-
 
NC_011663  Sbal223_0926  putative tricarboxylic transport membrane protein  42.58 
 
 
155 aa  106  2e-22  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3098  putative tricarboxylic transport membrane protein  42.58 
 
 
155 aa  105  3e-22  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0902  putative tricarboxylic transport membrane protein  42.58 
 
 
155 aa  105  3e-22  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0936  putative tricarboxylic transport membrane protein  42.58 
 
 
155 aa  105  3e-22  Shewanella baltica OS195  Bacteria  normal  normal  0.271067 
 
 
-
 
NC_008322  Shewmr7_0874  putative tricarboxylic transport membrane protein  42.58 
 
 
155 aa  105  4e-22  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3488  hypothetical protein  31.61 
 
 
163 aa  57.4  0.00000007  Jannaschia sp. CCS1  Bacteria  normal  0.916647  normal  0.0908777 
 
 
-
 
NC_009952  Dshi_3122  hypothetical protein  28.95 
 
 
162 aa  55.8  0.0000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.417087  normal 
 
 
-
 
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