| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0949 |
|---|
| Symbol | |
|---|
| ID | 5135081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 975125 |
|---|
| End bp | 975622 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640532407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001216895 |
|---|
| Protein GI | 147674013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACC TGCCAACCAA AATTTTCACC AAAGAAAACT TACTCTGCCG TGACCGAGTG
GGAGCCATGT TATTCCTGCT GTTCACCCTT GGTTACGGCT ATCAAACCTC ACTCATCACC
ATGTTTCCGA GCGATGAGTT GGAACCCTTT AACGCCCGAA CCTTACCGAC CATTCTGACT
TATGCTGGTA TCGGTTTATC GCTGCTACTG CTCGTAGTGG GTCAGCCGGA TAAAAAAAGC
GGTGCGGTGC TTGAGTTTAA CTGGAAACTG CTGATCGGCT TTTTGGTACT GATGGCACTG
TACGGTCTTG GCCTGACTTA TCTCGGCTTT GTGCTGGCCA CTTCCTTCTT CTTACTTGCT
GGTTTTTACC TGCTAGGCGA ACGACGTAAA AGCATCCTGT TTGGTGCTTC ATTCCCCTTC
GTGCTCGCTT TTTATTTGTT ACTGACCAAA GGACTGGATG TGTATCTAGA GCCGGGTCAT
CTGTTTACTT TCGGATAG
|
|---|
| Protein sequence | MSDLPTKIFT KENLLCRDRV GAMLFLLFTL GYGYQTSLIT MFPSDELEPF NARTLPTILT
YAGIGLSLLL LVVGQPDKKS GAVLEFNWKL LIGFLVLMAL YGLGLTYLGF VLATSFFLLA
GFYLLGERRK SILFGASFPF VLAFYLLLTK GLDVYLEPGH LFTFG
|
|---|
| |