12 homologs were found in PanDaTox collection
for query gene Tcur_3348 on replicon NC_013510
Organism: Thermomonospora curvata DSM 43183



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013510  Tcur_3348  protein of unknown function UPF0099  100 
 
 
226 aa  439  9.999999999999999e-123  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000347  n/a   
 
 
-
 
NC_013131  Caci_1324  protein of unknown function UPF0099  44.6 
 
 
261 aa  151  8e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0991  protein of unknown function UPF0099  48.56 
 
 
261 aa  146  3e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3414  hypothetical protein  49.04 
 
 
224 aa  143  3e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.331031  normal  0.0835917 
 
 
-
 
NC_013595  Sros_7201  hypothetical protein  42.99 
 
 
230 aa  119  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.312611  normal  0.134571 
 
 
-
 
NC_013159  Svir_29290  Peptidyl-tRNA hydrolase PTH2  40.09 
 
 
262 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.820939  normal  0.179625 
 
 
-
 
NC_013235  Namu_1689  protein of unknown function UPF0099  38.1 
 
 
286 aa  108  6e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  0.765723  normal  0.0247017 
 
 
-
 
NC_014151  Cfla_2875  protein of unknown function UPF0099  48.82 
 
 
243 aa  106  2e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.012965 
 
 
-
 
NC_013441  Gbro_3279  protein of unknown function UPF0099  38.79 
 
 
248 aa  94  2e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011879  Achl_4389  protein of unknown function UPF0099  28.84 
 
 
222 aa  51.2  0.00001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0873126 
 
 
-
 
NC_008553  Mthe_0865  peptidyl-tRNA hydrolase  31.11 
 
 
114 aa  43.9  0.002  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0809  peptidyl-tRNA hydrolase  35.42 
 
 
120 aa  43.1  0.003  Methanospirillum hungatei JF-1  Archaea  normal  0.0451427  normal  0.286988 
 
 
-
 
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