Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29290 |
Symbol | |
ID | 8388253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3171114 |
End bp | 3171902 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644976960 |
Product | Peptidyl-tRNA hydrolase PTH2 |
Protein accession | YP_003134734 |
Protein GI | 257056902 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.820939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.179625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG CCGACGGTCC CCACGAACCC GTCCTGGCCC CTGTGGCCGC GCGTTACGCG TGGTGGCTGG GACTGCCCGC CCATCGCACC GCGGAGCGGG ACGTGCCGCC CGAACAGGTG TGGGCGATGC CGGTGGTGTT ACGCATGGAG AAGACGCGGC CGCCGTCGCG GACGTCGTTG TTGGAGGCCG CTGCCAGCGC TGCTCTCGCC GTATGCCTCG ACGACGAGGC TCGTCCCGGT GGTGCCTGGT ACGAACCGCT GTACACCTGG ACCTCGGGCC ACATCCGTAA GGTGGCGCGC CGGGCGCGGG GCGCGCATTG GGAGGCGGTG CAGCGGCTGC CGGGGGTGAC CGTCGACGTG GCCGGTGCGC AGGCCAGGGC GCTGGTGCCC TGTCGGGTCG GTGACCTTCC CCGGGAAGTC GCGCGGCTGC AGATCTCCGG TAGTGACCTC CCCGCTGACG ATCCGGGGCC ACCCCCGGAC GACCGGCCGG TGCTGTTGCT CAACCCCCGG GTCGCGATGT CGGCGGGTAA GGCGGCCGCG CAGGTCGGGC ACGCCACGAT GTTGCTCGCG GCGTTGCTGG ACACCCCGGA CCTCACCGTA TGGGCGATGC GGGACTACCG GTGCGCGGTG CGGGTCGCTG ATCAGGACTT CTGGGACGAG GGTGTCGCCG CGGTGTCGGA CCCACAGCGG GCGTGGGGCG AACACGGTTT GGTGGCCGTC CGCGATGCCG GTTTCACCGA GGTCGAGCCG GGCACCGTCA CCGTGTTGGC CCGCTGGTCC CGATCCTGA
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Protein sequence | MTIADGPHEP VLAPVAARYA WWLGLPAHRT AERDVPPEQV WAMPVVLRME KTRPPSRTSL LEAAASAALA VCLDDEARPG GAWYEPLYTW TSGHIRKVAR RARGAHWEAV QRLPGVTVDV AGAQARALVP CRVGDLPREV ARLQISGSDL PADDPGPPPD DRPVLLLNPR VAMSAGKAAA QVGHATMLLA ALLDTPDLTV WAMRDYRCAV RVADQDFWDE GVAAVSDPQR AWGEHGLVAV RDAGFTEVEP GTVTVLARWS RS
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