11 homologs were found in PanDaTox collection
for query gene Swit_3325 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_3325  ethyl tert-butyl ether degradation EthD  100 
 
 		 189 aa  376  1e-104  Sphingomonas wittichii RW1  Bacteria  normal  0.151498  hitchhiker  0.000641272 
 
 
-
 
NC_009511  Swit_2009  ethyl tert-butyl ether degradation EthD  30.33 
 
 		 125 aa  54.7  0.0000007  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_3331  ethyl tert-butyl ether degradation EthD  37.61 
 
 		 120 aa  54.7  0.0000007  Sphingomonas wittichii RW1  Bacteria  normal  1  hitchhiker  0.00220158 
 
 
-
 
NC_009427  Saro_3720  ethyl tert-butyl ether degradation EthD  33.57 
 
 		 274 aa  53.1  0.000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.81836  n/a   
 
 
-
 
NC_009921  Franean1_5806  ethyl tert-butyl ether degradation EthD  33.03 
 
 		 119 aa  52  0.000005  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1862  hypothetical protein  29.09 
 
 		 249 aa  49.3  0.00003  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.530634 
 
 
-
 
NC_013739  Cwoe_2091  Ethyl tert-butyl ether degradation EthD  28.87 
 
 		 227 aa  47.4  0.0001  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal  0.246638 
 
 
-
 
NC_013530  Xcel_2866  Ethyl tert-butyl ether degradation EthD  27.48 
 
 		 217 aa  45.4  0.0005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3852  ethyl tert-butyl ether degradation EthD  26.61 
 
 		 136 aa  43.9  0.001  Frankia sp. EAN1pec  Bacteria  normal  0.0818324  normal  1 
 
 
-
 
NC_011729  PCC7424_4710  Ethyl tert-butyl ether degradation EthD  26.47 
 
 		 232 aa  44.3  0.001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
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NC_009719  Plav_3012  ethyl tert-butyl ether degradation EthD  24.55 
 
 		 127 aa  41.2  0.008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.675409 
 
 
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