Gene Swit_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3331 
Symbol 
ID5197636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3660881 
End bp3661243 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content71% 
IMG OID640582876 
Productethyl tert-butyl ether degradation EthD 
Protein accessionYP_001263815 
Protein GI148556233 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00220158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCGGG TCAAGTCGAT CGCCTTGCTG CGCCGCCGGG CGGACCTGAG CCGCGAGGCG 
TTCGTCGACT ATTACGAGAC GCGGCACGTG CCGCTGATCC GGTCGCTGCT GCCCGGCATC
GTCGACTATC GCCGCAACTT CGCCGACTTC GACGGCGCCT ATGTCAATGC CGGCGCGGCG
CCGTTCGACT TCGACGTGGT GACCGAGCTG TGGTTCGCCG ACCGCGCGGC CTATGACCGC
GCGATGGCCC GCGCCGCCGA TCCCGCGGTC GCCGCGCGGA TCGCCGCCGA CGAGGAGAAT
TTCCTCGACC GGTCGGGCAC GCGGATGTTC CTGGTCGAGG AGCGCGTCAG CCCGGCGGGC
TGA
 
Protein sequence
MSRVKSIALL RRRADLSREA FVDYYETRHV PLIRSLLPGI VDYRRNFADF DGAYVNAGAA 
PFDFDVVTEL WFADRAAYDR AMARAADPAV AARIAADEEN FLDRSGTRMF LVEERVSPAG