7 homologs were found in PanDaTox collection
for query gene Svir_27620 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_27620  predicted transcriptional regulator  100 
 
 
166 aa  337  5e-92  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1437  transcriptional regulator, ArsR family  58.39 
 
 
162 aa  181  6e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2967  transcriptional regulator, ArsR family  42.21 
 
 
183 aa  118  3e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.048308 
 
 
-
 
NC_008541  Arth_2815  ArsR family transcriptional regulator  38.93 
 
 
169 aa  116  1.9999999999999998e-25  Arthrobacter sp. FB24  Bacteria  normal  0.897524  n/a   
 
 
-
 
NC_014210  Ndas_2260  transcriptional regulator, ArsR family  46.72 
 
 
183 aa  113  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.1059  normal  0.463419 
 
 
-
 
NC_013595  Sros_7611  ArsR family transcriptional regulator  29.24 
 
 
185 aa  51.2  0.000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0259  transcriptional regulator, ArsR family  28.21 
 
 
171 aa  44.7  0.0005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.792172  normal  0.339898 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>