Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0259 |
Symbol | |
ID | 8331586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 290407 |
End bp | 290922 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953426 |
Product | transcriptional regulator, ArsR family |
Protein accession | YP_003111053 |
Protein GI | 256389489 |
COG category | [K] Transcription |
COG ID | [COG4189] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.792172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.339898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCACCG ACGAAGAGCC AGACGCCATC CACATCCAAA GCGACGAGCA ACTACGCGCC GTCGCCAGCC ACACCCGCCA CCGGATCCTG CGCGTGCTGC GGGACAAGCC CGCCACCATC ACCCAGGTCG CCGAGCGCCT GGGCATCGCC AAGGGCAGCT CCAACCACCA CATGAAGGTG CTGGCGAAGG CCGGGCTGGT GGCGGTCGTG GAGACCCGCA AGGTCGGCGG CGTCACCGAG CAGTACTACG CGATGACCGG ACGGACCATC GAGCTGCCGG AGACCGGCGC CGGGCAGCCG GAGATGCTGA TGCGCCACGC ATTGGCCGAC ATCGAGGCCG CGCCGCCGAG CGACCAGCGG ACGGTGTTCT TGAAGCACGC ACGCCTCAGC CCCGAGGCGT GGGTGGAGTT CAACGAGCGG CTCCAGGCTC TGATCGGGGA ACTGCACGAC GCCTCCGATC CCACGCAGCC GGCCGCTGAC CTGTTCGTTG CGTTCTACCG ACCGAAGGAC GTCTGA
|
Protein sequence | MPTDEEPDAI HIQSDEQLRA VASHTRHRIL RVLRDKPATI TQVAERLGIA KGSSNHHMKV LAKAGLVAVV ETRKVGGVTE QYYAMTGRTI ELPETGAGQP EMLMRHALAD IEAAPPSDQR TVFLKHARLS PEAWVEFNER LQALIGELHD ASDPTQPAAD LFVAFYRPKD V
|
| |