4 homologs were found in PanDaTox collection
for query gene Ssed_1744 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1744  prophage MuSo1, protein Gp32, putative  100 
 
 
44 aa  94.7  3e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.328119  hitchhiker  0.0000468924 
 
 
-
 
NC_009997  Sbal195_2143  prophage MuSo1, protein Gp32, putative  60.98 
 
 
386 aa  54.3  0.0000006  Shewanella baltica OS195  Bacteria  normal  0.32747  normal 
 
 
-
 
NC_009665  Shew185_2096  prophage MuSo1, protein Gp32, putative  58.54 
 
 
375 aa  53.1  0.000001  Shewanella baltica OS185  Bacteria  normal  0.581443  n/a   
 
 
-
 
NC_004347  SO_0674  prophage MuSo1, protein Gp32, putative  65.85 
 
 
389 aa  46.6  0.0001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
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