Gene Shew185_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2096 
Symbol 
ID5370185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2502679 
End bp2503806 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content53% 
IMG OID640830305 
Productprophage MuSo1, protein Gp32, putative 
Protein accessionYP_001366301 
Protein GI153000620 
COG category[R] General function prediction only 
COG ID[COG4388] Mu-like prophage I protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.581443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCAA CATCCATCGC TTTGGGCTTT GCCGCCTTAA GCAGCCAGTT AAATGTCAAT 
CCAGAAGCCG CCTTTGTGGT TGGTGAAGAT GGCTACATTC AGGCGCTGCC TGATGGCCAC
TTTGCCAGCG TAGATGGTCG CCCTGATGAT GTAGCTGGTG GCAAGTGGTT GATGGATAGC
GTTGCGTTCG CGGCCCTGCA AGCAAATACC CCCCATAAAG CCGGTGATCT GGTTATTGAC
TACGAACACC AAACCCTCAA CAAAGAGAAG AATGGCCAGC CTGCACCCGC TGCGGGTTGG
TTCAACATCG ATGACGTGCA ATATCGACAA GGGCTGGGCT TGTTTATTAA GCCGCGCTTT
ACCGATAACG CCATCGCTTA TCTTACCGCT AAAGAATACA AGTACTTCAG CCTAGTGTTC
GGTTACGACA CCAGCACTGG CCGCCCGCAA TTTATCCACT CAGCCGCATT AACTAACCGC
CCTGGTGTCG ATGGCATGCT GCCACTCGCA TCGTTGGCTG CACTGGCTGC TCTTAATACA
AGCCTCAATC CACACGAACC TATCCAATCT ACCGACACGG AGGAACTCCA TGTGAACCCA
TTACTGAGAA AAATCTTAGC CGCCTTGGGC GTTGACATTC CCGATGACGT GACAGCTTTA
ACCGCTGAGC AAGAGGTCGC GGCGCTATCT GCACTTAATA CGCTAACCAC GGCAGCAAAT
AGCGTGGATG GCTTAAAGCA ACAGCTTACC GCGCTGAGTG CTACATCGCC CTCGGTTGAT
CTAAGCCAGT ACGTTCCTGT GGCCACGGTC GCGGCCCTGC GCGCGCAGCT GGTTGCGCTA
ACTGCTGAAA ACGGTGTGCT TACCGTTGAG CAAACCGTGA AGGAGGCGAT AGATGAAGGC
AAAGCCTTTG AGTGCGAACG TGATTACCTA ACCAAGTTAG GCAAGCAATC CATGGCGGCG
CTTACAGCCA ACCTGGGTGA GCGTGTGGCT ATTGCCGCAT TAACGGCCAA GCAAACCACC
ACAGTTCCCG ATCCTATCAA GGACAAGGAA ACCAAACTCG CGGCACTGAC TGCCGACGAA
ATCAAAATGG CCGATTCTTG GGGCATGTCG CACGCTGTTC TGGTCTAA
 
Protein sequence
MPATSIALGF AALSSQLNVN PEAAFVVGED GYIQALPDGH FASVDGRPDD VAGGKWLMDS 
VAFAALQANT PHKAGDLVID YEHQTLNKEK NGQPAPAAGW FNIDDVQYRQ GLGLFIKPRF
TDNAIAYLTA KEYKYFSLVF GYDTSTGRPQ FIHSAALTNR PGVDGMLPLA SLAALAALNT
SLNPHEPIQS TDTEELHVNP LLRKILAALG VDIPDDVTAL TAEQEVAALS ALNTLTTAAN
SVDGLKQQLT ALSATSPSVD LSQYVPVATV AALRAQLVAL TAENGVLTVE QTVKEAIDEG
KAFECERDYL TKLGKQSMAA LTANLGERVA IAALTAKQTT TVPDPIKDKE TKLAALTADE
IKMADSWGMS HAVLV