11 homologs were found in PanDaTox collection
for query gene Smed_5985 on replicon NC_009621
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009621  Smed_5985  glucan 1,4-alpha-glucosidase  100 
 
 		 480 aa  980    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.377487 
 
 
-
 
NC_011666  Msil_0405  Glucan 1,4-alpha-glucosidase  27.88 
 
 		 477 aa  107  5e-22  Methylocella silvestris BL2  Bacteria  n/a    normal  0.878783 
 
 
-
 
BN001307  ANIA_11143  glucoamylase (Eurofung)  28.15 
 
 		 619 aa  106  9e-22  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.124619  normal  1 
 
 
-
 
NC_006368  lpp0489  hypothetical protein  25.93 
 
 		 435 aa  96.7  9e-19  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
BN001304  ANIA_07402  glucoamylase (Eurofung)  27.92 
 
 		 661 aa  95.5  2e-18  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  1 
 
 
-
 
NC_006369  lpl0465  hypothetical protein  25.47 
 
 		 435 aa  95.5  2e-18  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009048  PICST_33726  Glucoamylase GLU1 precursor (Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase)  22.81 
 
 		 560 aa  88.2  3e-16  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.259511 
 
 
-
 
NC_009621  Smed_6051  thiamine pyrophosphate binding domain-containing protein  67.61 
 
 		 393 aa  85.5  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.221657  normal  0.609485 
 
 
-
 
NC_007643  Rru_A3302  glucan 1,4-alpha-glucosidase  24.44 
 
 		 456 aa  83.2  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.219547  n/a   
 
 
-
 
NC_012792  Vapar_5525  Glucan 1,4-alpha-glucosidase  23.16 
 
 		 463 aa  70.5  0.00000000006  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_006687  CNE02630  glucan 1,4-alpha-glucosidase, putative  23.09 
 
 		 577 aa  60.1  0.00000008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
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