6 homologs were found in PanDaTox collection
for query gene Sden_0612 on replicon NC_007954
Organism: Shewanella denitrificans OS217



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_0612  hypothetical protein  100 
 
 
217 aa  443  1.0000000000000001e-124  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0517  putative plasmid transfer protein  29.75 
 
 
398 aa  71.6  0.000000000008  Shewanella loihica PV-4  Bacteria  normal  0.359059  normal 
 
 
-
 
NC_010506  Swoo_0619  putative plasmid transfer protein  30.25 
 
 
397 aa  68.2  0.00000000009  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4044  putative plasmid transfer protein  37.29 
 
 
357 aa  64.7  0.000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0557  putative plasmid transfer protein  33.85 
 
 
397 aa  54.3  0.000001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3174  putative outer membrane or exported  30.3 
 
 
397 aa  52  0.000006  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>