15 homologs were found in PanDaTox collection
for query gene SNSL254_A1507 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011080  SNSL254_A1507  type III secretion apparatus protein YscD/HrpQ family  100 
 
 		 399 aa  815    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.574995  hitchhiker  0.00233459 
 
 
-
 
NC_011083  SeHA_C1529  type III secretion apparatus protein, YscD/HrpQ family  99 
 
 		 399 aa  809    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.055163 
 
 
-
 
NC_011094  SeSA_A1492  type III secretion apparatus protein, YscD/HrpQ family  99.25 
 
 		 399 aa  810    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.519632 
 
 
-
 
NC_011149  SeAg_B1777  type III secretion apparatus protein, YscD/HrpQ family  98.75 
 
 		 399 aa  808    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0349319  n/a   
 
 
-
 
NC_011205  SeD_A1947  type III secretion apparatus protein, YscD/HrpQ family  100 
 
 		 399 aa  815    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.389941 
 
 
-
 
NC_009708  YpsIP31758_3829  YscD/HrpQ family type III secretion apparatus protein  30.62 
 
 		 404 aa  205  1e-51  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3916  YscD/HrpQ family type III secretion apparatus protein  30.62 
 
 		 404 aa  205  1e-51  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3942  YscD/HrpQ family type III secretion apparatus protein  30.62 
 
 		 403 aa  199  9e-50  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2250  YscD/HrpQ family type III secretion apparatus protein  28.57 
 
 		 401 aa  143  4e-33  Shewanella baltica OS195  Bacteria  normal  0.123284  normal  0.0388601 
 
 
-
 
NC_009052  Sbal_1947  YscD/HrpQ family type III secretion apparatus protein  28.12 
 
 		 401 aa  142  9.999999999999999e-33  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_5053  type III secretion apparatus protein, YscD/HrpQ family  23.97 
 
 		 406 aa  99.4  1e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_42340  type III export protein PscD  25.11 
 
 		 432 aa  60.5  0.00000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_01701  hypothetical protein  23.41 
 
 		 433 aa  53.9  0.000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003338  type III secretion inner membrane protein YscD  22.49 
 
 		 433 aa  53.5  0.000006  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_010157  YpAngola_B0055  type III secretion apparatus protein YscD  26.58 
 
 		 419 aa  45.8  0.001  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>