12 homologs were found in PanDaTox collection
for query gene Rpic12D_4764 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012855  Rpic12D_4764  hypothetical protein  100 
 
 		 200 aa  403  1.0000000000000001e-112  Ralstonia pickettii 12D  Bacteria  normal  0.974143  normal  1 
 
 
-
 
NC_007972  Rmet_6289  hypothetical protein  42.78 
 
 		 210 aa  142  4e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.0281067  normal  1 
 
 
-
 
NC_010679  Bphyt_7248  hypothetical protein  32 
 
 		 214 aa  104  1e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_3700  hypothetical protein  31.13 
 
 		 187 aa  59.3  0.00000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.875066 
 
 
-
 
NC_010515  Bcenmc03_5914  PilS domain-containing protein  31.91 
 
 		 202 aa  52.8  0.000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.353424  hitchhiker  0.00844308 
 
 
-
 
NC_008835  BMA10229_1984  putative type IV pilus biogenesis protein  33.08 
 
 		 196 aa  45.1  0.0007  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A2252  putative type IV pilus protein  33.08 
 
 		 196 aa  45.1  0.0007  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A0663  putative type IV pilus biogenesis protein  33.08 
 
 		 196 aa  45.1  0.0007  Burkholderia mallei NCTC 10247  Bacteria  normal  0.655002  n/a   
 
 
-
 
NC_006349  BMAA1605  putative type IV pilus biogenesis protein  33.08 
 
 		 184 aa  45.1  0.0008  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0158393  n/a   
 
 
-
 
NC_008757  Pnap_4333  putative fimbrial protein  27.32 
 
 		 197 aa  44.3  0.001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.306906  normal  0.754406 
 
 
-
 
NC_007435  BURPS1710b_A0651  putative major pilin subunit  32.33 
 
 		 184 aa  43.1  0.002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2168  putative type IV pilus protein  32.33 
 
 		 196 aa  43.5  0.002  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00445151  n/a   
 
 
-
 
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