16 homologs were found in PanDaTox collection
for query gene Rmet_1534 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007973  Rmet_1534  hypothetical protein  100 
 
 		 101 aa  205  2e-52  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00103217  normal  0.023944 
 
 
-
 
NC_008340  Mlg_2020  hypothetical protein  39.29 
 
 		 379 aa  62.8  0.000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A1167  putative hydrogenase expression/formation protein HupK  35.48 
 
 		 406 aa  55.5  0.0000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.819635  n/a   
 
 
-
 
NC_007958  RPD_1172  coenzyme F420-reducing hydrogenase alpha subunit-like  38.1 
 
 		 370 aa  51.2  0.000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.903456  normal  1 
 
 
-
 
NC_011004  Rpal_1164  hydrogenase expression/formation  34.34 
 
 		 369 aa  50.4  0.000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0669591  n/a   
 
 
-
 
NC_008576  Mmc1_2497  Ni,Fe-hydrogenase I large subunit  34.25 
 
 		 379 aa  48.1  0.00004  Magnetococcus sp. MC-1  Bacteria  normal  0.633578  normal  0.13514 
 
 
-
 
NC_012560  Avin_50500  hydrogenase expression/formation protein HoxV  37.18 
 
 		 348 aa  45.8  0.0002  Azotobacter vinelandii DJ  Bacteria  normal  0.102569  n/a   
 
 
-
 
NC_008781  Pnap_1965  hypothetical protein  36.36 
 
 		 390 aa  45.4  0.0003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.241509  normal  1 
 
 
-
 
NC_011662  Tmz1t_0441  hypothetical protein  33.33 
 
 		 397 aa  43.5  0.001  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2005  hydrogenase expression/formation  35.14 
 
 		 368 aa  41.6  0.003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.432728  normal  1 
 
 
-
 
NC_007908  Rfer_4118  putative hydrogenase expression/formation protein HupK  42.03 
 
 		 391 aa  41.6  0.004  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_1287  hypothetical protein  32.35 
 
 		 384 aa  41.6  0.004  Cupriavidus metallidurans CH34  Bacteria  normal  0.272363  normal  0.489405 
 
 
-
 
NC_007925  RPC_3763  putative hydrogenase expression/formation protein HupK  35.06 
 
 		 373 aa  41.2  0.005  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1153  nickel-dependent hydrogenase large subunit  25.81 
 
 		 481 aa  40.8  0.006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_1161  nickel-dependent hydrogenase, large subunit  28.26 
 
 		 481 aa  40.4  0.009  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_3774  nickel-dependent hydrogenase, large subunit  26.37 
 
 		 480 aa  40  0.01  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.967031 
 
 
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