| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3774 |
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| Symbol | |
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| ID | 3969367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4195286 |
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| End bp | 4196728 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637926884 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_533628 |
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| Protein GI | 90425258 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.967031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGGA TCACGGTCGG CCCGTTCAAC CGCGTCGAGG GCGATCTCGA AGTGCGGCTC
GATATCGACG ACGGCGTGGT GGTGTCGGCC GAAGTCACCG CGCCGCTCTA TCGCGGCTTC
GAGCAGATTC TCGAAGGCCG GCCTTCGCTC GATGCGTTGA CGCTGGCGCC GCGGATCTGC
GGCATCTGCT CGGTGTCGCA GTCGATGGCG GCGGTGGCGG CGCTGCGTGC GGTTGACGGC
TTGCACCCGG CGCCGAACGG CCTACACGCC GCCAATATCG CCCACGCCGC GGAGAACGCC
GCCGATCACC TGACGCATTT CTACGTGTTC TTCATGCCGG ATTTTGCCCG CGACAGCTAC
GCGGCGTGGC CCTGGCACCC CGCGGTCGCC GAACGCTTCA CCGCCACGCG AGGCACCGCC
GCGCGAGAGG TGCTGCCGGC GCGGGCGAGG CTGTTGGAGA TCATGGGACT GATCGCCGGC
AAATGGCCGC ACAGTCTGGC GTTTCAACCC GGCGGCACGA CCCGCGCGAT CGGGCTCGGA
GAACGGGTGC GGCTGTTGTC GATCATCGCC GACTTCCGCG GCTTTCTGGA ATCCATCGTG
TTCGGCGACG ATCTCGAGGC GGTGCTGGCG CTGCGCAGCG CCGCGGCGCT GGAGAGTTGG
CGCGATGGCC GCATTGGTGA CTTCGCAAGA TTTCTCGCCA TCGCCGACGA CCTCGCACTC
GACAAGCTCG GCCGTGGCGC GACGTCGTTG ATGAGCTTCG GCGCCTATCA AGGCCTGGAG
GCGCCGTTGT TCGCCGCTGG CCTCTATGAT CCCGCGACGT CGACGCCGCG CGTGCTCGAC
ATCGACGCCA TCACCGAGGA TGTCTCGCAC GCCTGGATGC GCGACACCGC GGCCGAGCCG
GCTCTGGCGC AGACGCTGCC CGACGCCGAT CGCCCGGGCG GCTATAGCTG GTGCAAGGCG
CCTAGGCTCG ACAGCCGGCC GATCGAGGTC GGCGCGCTGG CGCGGCAGGC GGTCGACGGC
GATGCCCTGA TCCGCGATCT GGTGCGGCGC CATGGCCCTA ACGTGAGAAC CCGCGTCATC
GCCCGGCTGC TGGAAACCGC GCGGTTGGCG TTGGCGATGG ATCGCTGGGC GCGGCAGATC
GCGCTCGACG CGCCGTTTCT CGATGCCGCC GCGCGGGTGG GCGAGGGCGC CGGCATTGGT
CTTGTGGAGG CCGCACGAGG CAGCCTCGGC CATTGGATCG AACTCTCGGG CGACCGCATC
CGCCGCTATC AGATCATCGC GCCGACCACC TGGAATTTTT CGCCGCGCGA TGCCGACGGC
GTCGCCGGGC CGCTGGAGCA GGCGCTGGTC GGCACCCCGG TCGGCGCCGA GGGCGCGGCC
TCGGTCGCGG TGCAGCACGT GGTGCGGTCG TTCGATCCCT GCATGGTGTG CACCGCACAT
TAG
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| Protein sequence | MRRITVGPFN RVEGDLEVRL DIDDGVVVSA EVTAPLYRGF EQILEGRPSL DALTLAPRIC
GICSVSQSMA AVAALRAVDG LHPAPNGLHA ANIAHAAENA ADHLTHFYVF FMPDFARDSY
AAWPWHPAVA ERFTATRGTA AREVLPARAR LLEIMGLIAG KWPHSLAFQP GGTTRAIGLG
ERVRLLSIIA DFRGFLESIV FGDDLEAVLA LRSAAALESW RDGRIGDFAR FLAIADDLAL
DKLGRGATSL MSFGAYQGLE APLFAAGLYD PATSTPRVLD IDAITEDVSH AWMRDTAAEP
ALAQTLPDAD RPGGYSWCKA PRLDSRPIEV GALARQAVDG DALIRDLVRR HGPNVRTRVI
ARLLETARLA LAMDRWARQI ALDAPFLDAA ARVGEGAGIG LVEAARGSLG HWIELSGDRI
RRYQIIAPTT WNFSPRDADG VAGPLEQALV GTPVGAEGAA SVAVQHVVRS FDPCMVCTAH
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