| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1153 |
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| Symbol | |
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| ID | 6408809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1222957 |
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| End bp | 1224402 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711051 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001990168 |
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| Protein GI | 192289563 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGC GAATTACGGT CGGCCCGTTC AACCGCGTCG AAGGCGATCT GGAAGTCCGG
CTCGATCTCG ACGACGGCGT CGTCCGGTCG GCCGAAGTCA CCGCACCTTT GTATCGCGGC
TTCGAACAAA TCTTGCGCGG GCGATCGGCG ATGGATGCGC TGACCCTGGT GCCGCGGATC
TGCGGCATCT GCTCGGTGTC GCAGTCGATG GCCGCGGTGG CGGCGCTGCG GGCCGCCGGC
GGCGTACGGC CGGCGCGCAA CGGCGTGCTT GCCGCCAATT TGGCGCACGC GGCCGAGAAC
GCGGCCGATC ACCTGACGCA CTTCTATCTG TTCTTCATGC CGGACTTCGC CCGCGACGCT
TATGCGGGGC GGCCGTGGCA TCCTGAGATC GCGGCTCGCT TCAAGGCGGT GCAAGGCAGC
GCGGCGCAGG CGATGCTGCC GGCGCGGGCA AGGCTGTTGC AGATCATGGG CCTGCTCGCC
GGCAAATGGC CGCACAGCCT GGCGTTTCAG CCGGGCGGCA CGACCTGCGC GATCGATCTC
GGCGAGCGGG TGCAACTGCT GTCGATCATC GGCGATTTCC GCGATTTTCT CGAACGCACA
ATGTTCGGCG ACAGTCTCGA CAACGTGCTG GCGATCGACA GCGTGGCGGC ACTGGAAGCT
TGGCGTGACG GCCGCGGCGG CGATTTCGCC CGTTTCCTTG CGGTGGCCGA CGATCTTGCG
CTGCATCGGC TCGGCCGGAT CGCGCTGCCG TTGATGAGCT TCGGCGCGTA TCACGGCGAG
GATGCACCGC TGTTTGCGGC CGGCGTGCTC GATCCATTAA GTGCGGCGCG GACGTCGTTC
GATCCTGCCG CGATCACCGA GGATGTGGCT CGTGCCTGGA TGCGCGACAC CTCGCTGTCG
CCGCTGGAAG CCGACACCGA CCCCGATGCG GACAAGCCCG CCGGCTATAG CTGGTGCAAG
GCGCCCCGGC TCGCTGGCGG CCCGGCCGAA GTCGGCGCGT TGGCCCGGCA GGCGATCGAC
GGCGATCCGC TGATCCGCGA TTGTGTCGCC CGTTTCGGTT CGTGCGTCAC AACCCGGGTC
GTTGCGCGAT TGCGCGAGAC CGCCCGGCTG GCGCTGGCGA TGCATCAGTG GGCGCGGCAA
CTCGATCTTG CCGAGCCGTT TCTGGAGCGG GGCGAGCGGG GGCGGGACGG CACCGGCATT
GGCCTCGTCG AAGCTGCCCG CGGCAGCCTC GGTCACTGGA TCGAGCTGCG CGGCGACAGC
ATCCGCCGCT ATCAGATCAT CGCGCCGACC AGCTGGAATT TCTCGCCGCG TGATCGCGGC
GGCGTTCCGG GGCCGCTCGA ACAAGCGCTG GTCGGCACGC CGGTCGGTGA TGCCGGCGCA
CGCGCAGTGA CGATCCAGCA CGTCGTGCGT TCGTTCGATC CCTGCATGGT GTGCACCGCG
CACTAA
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| Protein sequence | MTRRITVGPF NRVEGDLEVR LDLDDGVVRS AEVTAPLYRG FEQILRGRSA MDALTLVPRI
CGICSVSQSM AAVAALRAAG GVRPARNGVL AANLAHAAEN AADHLTHFYL FFMPDFARDA
YAGRPWHPEI AARFKAVQGS AAQAMLPARA RLLQIMGLLA GKWPHSLAFQ PGGTTCAIDL
GERVQLLSII GDFRDFLERT MFGDSLDNVL AIDSVAALEA WRDGRGGDFA RFLAVADDLA
LHRLGRIALP LMSFGAYHGE DAPLFAAGVL DPLSAARTSF DPAAITEDVA RAWMRDTSLS
PLEADTDPDA DKPAGYSWCK APRLAGGPAE VGALARQAID GDPLIRDCVA RFGSCVTTRV
VARLRETARL ALAMHQWARQ LDLAEPFLER GERGRDGTGI GLVEAARGSL GHWIELRGDS
IRRYQIIAPT SWNFSPRDRG GVPGPLEQAL VGTPVGDAGA RAVTIQHVVR SFDPCMVCTA
H
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