7 homologs were found in PanDaTox collection
for query gene Rleg_5425 on replicon NC_012853
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012853  Rleg_5425    100 
 
 
1137 bp  2254    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0210727 
 
 
-
 
NC_012850  Rleg_2374  Chloride channel core  81.99 
 
 
1791 bp  81.8  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.124913  decreased coverage  0.00191401 
 
 
-
 
NC_011369  Rleg2_2134  Chloride channel core  79.69 
 
 
1791 bp  63.9  0.00000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.262546  normal  0.105647 
 
 
-
 
NC_010725  Mpop_2902  Chloride channel core  90 
 
 
1845 bp  60  0.000001  Methylobacterium populi BJ001  Bacteria  normal  0.452389  normal 
 
 
-
 
NC_011989  Avi_2161  chloride channel protein  92.5 
 
 
1785 bp  56  0.00002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0490  voltage gated chloride channel family protein  83.15 
 
 
1791 bp  50.1  0.001  Brucella suis 1330  Bacteria  normal  0.889673  n/a   
 
 
-
 
NC_009505  BOV_0494    83.15 
 
 
1785 bp  50.1  0.001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
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