| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2161 |
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| Symbol | clc |
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| ID | 7387877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1774281 |
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| End bp | 1776065 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651357 |
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| Product | chloride channel protein |
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| Protein accession | YP_002549552 |
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| Protein GI | 222148595 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAACA AGCCCTTTCA ATCTCCCAGC ACGGCCAGCT TTCTCAACAA TCTGAAAGCC
TCCCGGCTTC AGGCGCTGCT GCGGCGGGGC GAATTGGGTC TGGTGGTGCT GGCCGCCATT
ATCGGCATAC TCGCGGGTTT GTTGGTGTCG CTGGTCAGTT TCTTAAGCGC CAGCCTGCAT
TTTCTAATCT TCGGCGTTGA GGGCACGTTG AGTGGCAGCG GCATCACCGG ACCCATCGTC
CTGGGTGGCC CCATTATCGG CGGCATCATT CTCGGCGTCA TTGTGTTCAT TCTGTCCAAA
ACCCGTAAAA AACCGATGGT GGACCCCATC GAGGCCAACG CATTGCATGG CGGACGGCTG
TCGCTGACCG ACAGCATCAT CGTTTGCGTG CAGAATATAA TTTCGAACGG CTTCGGGGCC
TCGGTCGGGC TGGAGGCCGG TTACACCCAG ATCGCCTCCG GCTTTGCCTC CAAGCTCGGC
GTCAAGCTGA AGCTGCGGCG CGGTGACTTA CGGCTGCTGG TCGGCTGCGG GGCCGCCGGT
GCGATTGCTG CGGCCTTCGA TGCGCCGCTG ACCGGTGCCT TCTATGCGGT TGAACTGATC
ATTGGCTCCT ATACCGTTGT TACTCTGGCA CCAGTGATTG TCTCGGCGCT GGTCGCCAAG
ATCGTTACCA GCCAGATCGG CGGGCAGGGG CTGTCCATCG ATATCGGTGC GGTCGGCAAT
ATTACCCCAA TCGACTACCT GCCCGCCGTC ATGCTCGGCA TCGTCTGCGC AGGCGTTGGC
ATCGTGCTCA TGCAGGCCGT CTCCTTCATC GAGGAAACCG CGCGCAAAAG CTTCATCTCG
CAGCCCTTCA GGCCGATGAT CGGCGGAATC ATTATCGGCC TTCTGGCGCT GGTTTCCCCA
CAGGTTCTGG CCGGTGGCCA CGGCGCGCTG CATATCAACC TCAATACCCA GAGCAGCCTT
TATGCGCTGG TTCTGCTGTT CGTGCTGAAA TCCATTGCCA GTGCCATCTC CATCGGCTCC
GGCTTTCGTG GCGGCCTGTT TTTCGCCTCG CTGTTCATGG GCGCGCTGCT TGGCAAGATC
TTTGCCTTTG GTGCCATGCT GTTTCCAGTT CTGACGCTGA CGCCGGTGAT TTATGCCGTG
GTTGGCATGA GCGCCTTTGC CGCCGCTGTC ATTGGTGGAC CGCTGACCAT GACCTTCCTG
GCTCTGGAAT TGACCGGCGA CTTTCCGATC ACCGCGCTGG TGCTTGCTTC AGTCATCACG
ACGTCGCTGG TTGTGCGGGT GTCGTTCGGC TATTCCTTCG CCACCTGGCG TTTTCACCTG
CGCGGAGAAA CCATTCGCAG CGCCCAGGAT GTCGGCTGGA TACGAGACCT GACGGTGGCC
AAGATGATGC GCGCCGATGT CCGCACCGCC AAGCTCTCCA TGGGGCTTGA GGAATTCTGC
AAGCAATTTC CATTGGGCTC GACCCAGCGG GTCATCATGG TCAATGACGA CGGACGCTAT
GCCGGTATCG TGCTTTTGCC GGAAATCTAT GCCGATCCAA TGGACCGCGA GGATGAGAGC
CGCAGCCTGG AAACCTATCT GCGCTATACC AAGGATGTGC TTTTGCCGAC CATGAACGTC
AAGCAGGCCG CCGCCATCTT TGATTCGACT CAGAGCGAAG CACTGGCCGT CATGAATGAT
CGTGTGCAGA ACCGTCCCAT CGGCTTGCTG ACCGAAAGCC ACACGCTTCG CCGCTACAGC
GAAGAACTTG ACCTCAGACG CCGTGAGGTT GCAGGCGAGT TTTAA
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| Protein sequence | MLNKPFQSPS TASFLNNLKA SRLQALLRRG ELGLVVLAAI IGILAGLLVS LVSFLSASLH
FLIFGVEGTL SGSGITGPIV LGGPIIGGII LGVIVFILSK TRKKPMVDPI EANALHGGRL
SLTDSIIVCV QNIISNGFGA SVGLEAGYTQ IASGFASKLG VKLKLRRGDL RLLVGCGAAG
AIAAAFDAPL TGAFYAVELI IGSYTVVTLA PVIVSALVAK IVTSQIGGQG LSIDIGAVGN
ITPIDYLPAV MLGIVCAGVG IVLMQAVSFI EETARKSFIS QPFRPMIGGI IIGLLALVSP
QVLAGGHGAL HINLNTQSSL YALVLLFVLK SIASAISIGS GFRGGLFFAS LFMGALLGKI
FAFGAMLFPV LTLTPVIYAV VGMSAFAAAV IGGPLTMTFL ALELTGDFPI TALVLASVIT
TSLVVRVSFG YSFATWRFHL RGETIRSAQD VGWIRDLTVA KMMRADVRTA KLSMGLEEFC
KQFPLGSTQR VIMVNDDGRY AGIVLLPEIY ADPMDREDES RSLETYLRYT KDVLLPTMNV
KQAAAIFDST QSEALAVMND RVQNRPIGLL TESHTLRRYS EELDLRRREV AGEF
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