15 homologs were found in PanDaTox collection
for query gene Rcas_1279 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_1279  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
127 aa  262  1e-69  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.381542 
 
 
-
 
NC_009523  RoseRS_0526  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  83.33 
 
 
122 aa  197  5e-50  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0712178 
 
 
-
 
NC_013526  Tter_1971  hypothetical protein  48.18 
 
 
127 aa  102  2e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3454  pyridoxamine 5'-phosphate oxidase-related protein, FMN-binding  37.65 
 
 
127 aa  53.1  0.000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_11000  conserved hypothetical protein TIGR00026  34.83 
 
 
138 aa  47  0.00008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0473  hypothetical protein  29 
 
 
105 aa  46.2  0.0002  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0174667 
 
 
-
 
NC_008146  Mmcs_0736  hypothetical protein  40.82 
 
 
152 aa  41.6  0.004  Mycobacterium sp. MCS  Bacteria  normal  0.124352  n/a   
 
 
-
 
NC_008705  Mkms_0750  hypothetical protein  40.82 
 
 
152 aa  41.6  0.004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.162502 
 
 
-
 
NC_009077  Mjls_0730  hypothetical protein  40.82 
 
 
152 aa  41.6  0.004  Mycobacterium sp. JLS  Bacteria  normal  0.383544  normal  0.466048 
 
 
-
 
NC_009338  Mflv_0024  hypothetical protein  44.23 
 
 
130 aa  41.2  0.005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.441006  normal  0.869283 
 
 
-
 
NC_009341  Mflv_5607  hypothetical protein  33.33 
 
 
176 aa  40.8  0.006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2673  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.52 
 
 
127 aa  40.8  0.006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1788  hypothetical protein  30.19 
 
 
161 aa  40.8  0.006  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.370056 
 
 
-
 
NC_014158  Tpau_0956  hypothetical protein  31.03 
 
 
161 aa  40.4  0.008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.2542  n/a   
 
 
-
 
NC_013131  Caci_6204  hypothetical protein  29.17 
 
 
164 aa  40  0.01  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.474023  normal 
 
 
-
 
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