12 homologs were found in PanDaTox collection
for query gene RSp0862 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003296  RSp0862  Hrp associated protein HPAP  100 
 
 		 197 aa  385  1e-106  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.024551 
 
 
-
 
NC_010557  BamMC406_5642  hypothetical protein  33.7 
 
 		 317 aa  61.6  0.000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.79123  normal  0.10839 
 
 
-
 
NC_008392  Bamb_5859  hypothetical protein  30.84 
 
 		 306 aa  61.6  0.000000008  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_0451  hypothetical protein  36.76 
 
 		 302 aa  56.6  0.0000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.382848  normal  0.199451 
 
 
-
 
NC_007435  BURPS1710b_A0678  type III secretion protein HpaP  39.82 
 
 		 203 aa  55.8  0.0000004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.106802  n/a   
 
 
-
 
NC_009075  BURPS668_A2280  type III secretion protein HpaP  39.82 
 
 		 203 aa  55.8  0.0000004  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2197  type III secretion protein HpaP  39.82 
 
 		 203 aa  55.8  0.0000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.44965  n/a   
 
 
-
 
NC_007650  BTH_II0752  type III secretion inner membrane protein SctQ  43.75 
 
 		 202 aa  55.1  0.0000006  Burkholderia thailandensis E264  Bacteria  normal  0.502389  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1906  type III secretion protein HpaP  32.98 
 
 		 227 aa  55.1  0.0000006  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1998  type III secretion protein HpaP  32.98 
 
 		 224 aa  53.9  0.000002  Burkholderia pseudomallei 668  Bacteria  normal  0.191968  n/a   
 
 
-
 
NC_010515  Bcenmc03_5930  hypothetical protein  34.78 
 
 		 224 aa  50.4  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0314797 
 
 
-
 
NC_013721  HMPREF0424_0610  pullulanase, type I  31.25 
 
 		 1888 aa  42.4  0.004  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
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