Gene BURPS1710b_A0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0678 
Symbol 
ID3693713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand- 
Start bp875083 
End bp875694 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content76% 
IMG OID637730932 
Producttype III secretion protein HpaP 
Protein accessionYP_335837 
Protein GI76817287 
COG category 
COG ID 
TIGRFAM ID[TIGR02557] type III secretion protein HpaP 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.106802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCGATCTGAG GCCCGTGCGG ATCATCGCGG GCGCGCCCGC GGCCGAGCCG 
GCCGGTGCGC CGGCGCCGCG AGCCGCGCGG CGCGGCTTCG ACTACGCGCA GTTGATGCGG 
CGCTCGCGCG TCGCGCCGGC CGGCGCGCCC GCGCCGCGCG GCGACGGCGA ACGCCCGCGC 
GACGCGGCGA TGCCGTGGCG CGACGGCGCC GCGCCGTCGT TCGAGCGCGA TCCGGCCGCG 
CTGCCCGATG CGCTCGGCCG CGAGGCGATG GCGCGCGCGT GCGCGGGCGC CGATGCGTTC 
GTCAATCAGG TGTTCGCGCA GCGCGAGCGG GTGGTGCGCG TCGCCGAAGC GCTGGCCGCC 
GAGATCGCCG CGCTCGGCGG CGGCGACGCG TCGGGCCAGT GGGAGATCAG CCTGCCGCTC 
GACGCGGCGT TGCTGCCGGA TACGGTGCTG CATCTCGTTC TTTCGCGTTT CGACTTGCGG 
CTTCGGTTCG AGACGCCGGA CGCGGCGACG CGGCACTTAC TCTGCACACA TGGCGCGACG 
CTGCACGCGC GACTCGACAC GCTGCTCGCG CATCACGGCG CGCCGCGCAC GATCGAGATC 
GACGTCGGCT GA
 
Protein sequence
MSAADLRPVR IIAGAPAAEP AGAPAPRAAR RGFDYAQLMR RSRVAPAGAP APRGDGERPR 
DAAMPWRDGA APSFERDPAA LPDALGREAM ARACAGADAF VNQVFAQRER VVRVAEALAA 
EIAALGGGDA SGQWEISLPL DAALLPDTVL HLVLSRFDLR LRFETPDAAT RHLLCTHGAT 
LHARLDTLLA HHGAPRTIEI DVG