Gene BTH_II0752 details

Gene Information

• Locus tag: BTH_II0752
• ID: 3846271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 882172
• End bp: 882780
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 637838055
• Product: type III secretion inner membrane protein SctQ
• Protein accession: YP_438949
• Protein GI: 83717503
• TIGRFAM ID: [TIGR02557] type III secretion protein HpaP

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.502389
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCG CCGATCTGAG GCCCGTGCGG ATCATCGCGG GCGAGCCCGC GCCCGAGCCG 
GACGGCGCGC CGGCGCCGCG CGCGGCGCGC CGCGGCTTCG ACTACGCGCA GTTGATGCGG 
CGCTCGCGCG TTGCGCCCGC CGGCGAGCGC GCCGCGGCCG GCGACGAGCG GCGGCGCGAC 
GCGCTGATGC CGTGGCGCGA CGGCGCCGCG CCGCGGTTCG AGCGCGATCC GGCCGCGCTG 
CCGGATGCGC TCGGGCGCGA GGCGATGGCG CGCGCGCGCG CGGGCTCCGA CGCGTTCGTC 
AATCAGGTGT TCGCGCAGCG CGAGCGGATG GTGTGCGTCG CCGAAGCGCT CGCGCCCGAG 
ATCGCCGCGC TGTGCGGCAG CGACGCGTCG AACCGTTGGG AGATCAGCCT GCCGCTCGAC 
GCGGCGCTGC TGCCGGACAC GGTGCTGCAT CTCGTTCTTT CGCGTTTCGA CTTGCGGCTT 
CGGTTCCAGA CGCCCGACGC GGCGACGCGG CACTTACTCT GCACGCATGG CGCGACGCTG 
CACGCGCGAC TCGACACGCT GCTTGCGCAT CACGGCGCGC CGCGCGCGAT CGAGATCGAC 
GTCGACTGA 

 

Protein sequence

MSAADLRPVR IIAGEPAPEP DGAPAPRAAR RGFDYAQLMR RSRVAPAGER AAAGDERRRD 
ALMPWRDGAA PRFERDPAAL PDALGREAMA RARAGSDAFV NQVFAQRERM VCVAEALAPE 
IAALCGSDAS NRWEISLPLD AALLPDTVLH LVLSRFDLRL RFQTPDAATR HLLCTHGATL 
HARLDTLLAH HGAPRAIEID VD