5 homologs were found in PanDaTox collection
for query gene PputGB1_1052 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_1052  type II secretion system protein N  100 
 
 		 219 aa  417  1e-116  Pseudomonas putida GB-1  Bacteria  normal  0.116969  normal  1 
 
 
-
 
NC_009512  Pput_1096  hypothetical protein  79.36 
 
 		 220 aa  345  4e-94  Pseudomonas putida F1  Bacteria  normal  0.647974  normal  0.223188 
 
 
-
 
NC_002947  PP_1055  type II secretion pathway protein GspN  78.5 
 
 		 214 aa  334  5.999999999999999e-91  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_4171  type II secretion system protein N  68.04 
 
 		 219 aa  289  2e-77  Pseudomonas putida W619  Bacteria  normal  0.245137  normal  1 
 
 
-
 
NC_007954  Sden_0131  type II secretion system protein N  37.18 
 
 		 253 aa  45.8  0.0005  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
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