Gene Sden_0131 details

Gene Information

• Locus tag: Sden_0131
• ID: 4017215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 141236
• End bp: 141997
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637954104
• Product: type II secretion system protein N
• Protein accession: YP_561151
• Protein GI: 91791500

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTTTGA GTAAAAAAAT TATCTTAGCT GTCTTACTGT ACTTAGTGTT TTTATTGGCC 
TATATGCCGG TAAAGTGGCT AGCCAGCATC TTACCTATGC CAGCCAATAT CAGCCTAGCT 
GGAGTGAGCG GCACCCTGTG GGAAGGTCAA GCCGATTTGG TGCAGTTTGG CCCAAGACAA 
CTTGAGCAAG TGAACTGGAG CCTAAACCCT TGGGCGTTAC TGCTGGGGCA AGCCAATGTC 
GACATTAACA TAGGTAATCG CGCCACTGCA GTGAGTGCCA AAGCCGACAT TAGCTGGTCT 
TTATCGGGTA TTAAGGTGCA AGGCTTGCGT TTCGATGCCC CCGACAGCTT CTTGATTGCC 
GGGGCTAAAT TACCTTTTGC CACCCAAGTG CAGGGCGAGA TAAGCCTGAT GGTGCCTGAC 
TTTGTTCAAG GCAAACCTTT GTGTGAGCAG TTATCGGGTA AATTATTTTT AAATCATACC 
GATATGCGCA ATCAGTTTGG TGAATACCCG CTGGGGAATA TGGCGCTCAC CCTGAGCTGT 
CAAGGCGGGG AAGTGGCCAT CAGCATGTTA GAGGCAGACA ACAAGCTTGG GATCAGCGGT 
ATCATCTTGC TTGGCAGCGA CAACAGCATC AAGGTCACGG CTAAAGTCAA AGCCACCGAC 
GGCCAGCCCC AAGATATGCG CAATTCTCTG GCCTATCTAG GTAAACCCGA CAGTCAAGGT 
TACTACCCAG TTAACTACCA AGGCCGCATA CCTGGCTTGT AA 

 

Protein sequence

MSLSKKIILA VLLYLVFLLA YMPVKWLASI LPMPANISLA GVSGTLWEGQ ADLVQFGPRQ 
LEQVNWSLNP WALLLGQANV DINIGNRATA VSAKADISWS LSGIKVQGLR FDAPDSFLIA 
GAKLPFATQV QGEISLMVPD FVQGKPLCEQ LSGKLFLNHT DMRNQFGEYP LGNMALTLSC 
QGGEVAISML EADNKLGISG IILLGSDNSI KVTAKVKATD GQPQDMRNSL AYLGKPDSQG 
YYPVNYQGRI PGL