Gene Pput_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1096 
Symbol 
ID5190629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1232604 
End bp1233266 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID640585554 
Producthypothetical protein 
Protein accessionYP_001266441 
Protein GI148546339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.647974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.223188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA GTGCAGCAAT GGTCTGGGTG TTACTGGTAT TCGTGCTCAC GCTGTTTATC 
GAGCTTCCGG CCAATTGGGT GGTGCGTGCG TTCGGCCTGC CGGTACGCGA TGTCGGTGGA
AGCCTCTGGC AAGGGCAGGC ACAACAATGG GGGCCGGTCG GGCCTTTGCG CTGGACGCTG
CAGCCCTGGC GCTTGCAGGC GAATGCGCAA GTGGGGTTCC AGGGGCAGGC CTGGCAGTTG
CGTGCAGAAG GCTGGCCCTG GCGTTGGCGG CTGGAGGCAT CAGCCAAGGG GCCTTTGGCG
ACGGTCTCGA CGGATTACCG CCTGGCCGGC CAGTGGCAGG GTGTGTTGAG GATGCAGGGG
GCAGGGCGCC AATGCCAGGC CAGTGAAGGC CGCGTGATCG TAACCGACCT TGCCCTGAGC
GACCCTTGGT CCCTAGGCCT TGGGCACGGC TGGCTGGAAA TGGATTGCCG CAGTGGCTGG
CACCTGCGCG GGCAGTTGGC GCAGCAAGGG CAACATCAAC TGACCGTGGA TGCCGACCTG
CCAGGACGCC AGGCGCAGGT GGTGTTCCAG CTGCAGCCTG AAGCGCAGTT GACGCCATTG
TTGCGTGGCG CCCAATGGCT TGGGCCGCAG GCCTTGGCGG GGCAGCGAGA CCTTCGTTGG
TAA
 
Protein sequence
MSRSAAMVWV LLVFVLTLFI ELPANWVVRA FGLPVRDVGG SLWQGQAQQW GPVGPLRWTL 
QPWRLQANAQ VGFQGQAWQL RAEGWPWRWR LEASAKGPLA TVSTDYRLAG QWQGVLRMQG
AGRQCQASEG RVIVTDLALS DPWSLGLGHG WLEMDCRSGW HLRGQLAQQG QHQLTVDADL
PGRQAQVVFQ LQPEAQLTPL LRGAQWLGPQ ALAGQRDLRW