Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1096 |
Symbol | |
ID | 5190629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1232604 |
End bp | 1233266 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585554 |
Product | hypothetical protein |
Protein accession | YP_001266441 |
Protein GI | 148546339 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.647974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.223188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA GTGCAGCAAT GGTCTGGGTG TTACTGGTAT TCGTGCTCAC GCTGTTTATC GAGCTTCCGG CCAATTGGGT GGTGCGTGCG TTCGGCCTGC CGGTACGCGA TGTCGGTGGA AGCCTCTGGC AAGGGCAGGC ACAACAATGG GGGCCGGTCG GGCCTTTGCG CTGGACGCTG CAGCCCTGGC GCTTGCAGGC GAATGCGCAA GTGGGGTTCC AGGGGCAGGC CTGGCAGTTG CGTGCAGAAG GCTGGCCCTG GCGTTGGCGG CTGGAGGCAT CAGCCAAGGG GCCTTTGGCG ACGGTCTCGA CGGATTACCG CCTGGCCGGC CAGTGGCAGG GTGTGTTGAG GATGCAGGGG GCAGGGCGCC AATGCCAGGC CAGTGAAGGC CGCGTGATCG TAACCGACCT TGCCCTGAGC GACCCTTGGT CCCTAGGCCT TGGGCACGGC TGGCTGGAAA TGGATTGCCG CAGTGGCTGG CACCTGCGCG GGCAGTTGGC GCAGCAAGGG CAACATCAAC TGACCGTGGA TGCCGACCTG CCAGGACGCC AGGCGCAGGT GGTGTTCCAG CTGCAGCCTG AAGCGCAGTT GACGCCATTG TTGCGTGGCG CCCAATGGCT TGGGCCGCAG GCCTTGGCGG GGCAGCGAGA CCTTCGTTGG TAA
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Protein sequence | MSRSAAMVWV LLVFVLTLFI ELPANWVVRA FGLPVRDVGG SLWQGQAQQW GPVGPLRWTL QPWRLQANAQ VGFQGQAWQL RAEGWPWRWR LEASAKGPLA TVSTDYRLAG QWQGVLRMQG AGRQCQASEG RVIVTDLALS DPWSLGLGHG WLEMDCRSGW HLRGQLAQQG QHQLTVDADL PGRQAQVVFQ LQPEAQLTPL LRGAQWLGPQ ALAGQRDLRW
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