17 homologs were found in PanDaTox collection
for query gene Ppha_1549 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1549  plasmid maintenance system killer  100 
 
 
113 aa  234  4e-61  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2493  plasmid maintenance system killer  74.11 
 
 
113 aa  186  1e-46  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1442  killer suppression protein HigA, putative  48.65 
 
 
113 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  hitchhiker  0.00061572 
 
 
-
 
NC_013216  Dtox_1541  HigA  35.14 
 
 
110 aa  73.6  0.0000000000009  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000000399058  unclonable  0.0000000000952405 
 
 
-
 
NC_002977  MCA0276  killer suppression protein HigA, putative  34.55 
 
 
109 aa  65.5  0.0000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.853407  n/a   
 
 
-
 
NC_007643  Rru_A0005  killer suppression protein HigA, putative  31.86 
 
 
114 aa  60.8  0.000000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0482  hypothetical protein  31.53 
 
 
98 aa  55.5  0.0000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20200  plasmid maintenance system killer  32.43 
 
 
110 aa  53.9  0.0000006  Halothermothrix orenii H 168  Bacteria  normal  0.668044  n/a   
 
 
-
 
NC_007514  Cag_0237  killer suppression protein HigA, putative  34.57 
 
 
122 aa  50.4  0.000007  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1952  killer suppression protein HigA, putative  33.93 
 
 
111 aa  49.7  0.00001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1195  killer suppression protein HigA, putative  33.33 
 
 
111 aa  47.8  0.00006  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0534  AAA family ATPase  28.89 
 
 
112 aa  42.4  0.002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.943308  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1670  plasmid maintenance system killer protein  30.67 
 
 
105 aa  41.6  0.004  Coxiella burnetii RSA 331  Bacteria  normal  0.137882  n/a   
 
 
-
 
NC_013204  Elen_1061  plasmid maintenance system killer  35.53 
 
 
93 aa  41.2  0.004  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000720973 
 
 
-
 
NC_011901  Tgr7_0044  plasmid maintenance system killer  38.67 
 
 
92 aa  40.4  0.008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2973  plasmid maintenance system killer  38.67 
 
 
92 aa  40.4  0.009  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0020  plasmid maintenance system killer  34.62 
 
 
92 aa  40  0.01  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.184323  normal  0.0200834 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>