| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1442 |
|---|
| Symbol | |
|---|
| ID | 4460580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1788019 |
|---|
| End bp | 1788360 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639702211 |
|---|
| Product | killer suppression protein HigA, putative |
|---|
| Protein accession | YP_845568 |
|---|
| Protein GI | 116748881 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3549] Plasmid maintenance system killer protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00061572 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGATGGATA TCTTGTTTCG TAGTAAGAAA TTTGCGAAAG AGTGTAACCA GCAGGAGCTT
TTGGTCAAAC GCCACGGGGC GCAGAGAGCC AAACTGATCC GAAGGAGGCT CGACGAACTG
AGGGCTGCCG CAAACCTTGA GGTCATGCGG GCCCTCCCGC AGGCGCGTTG CCATGAACTG
AAAGGCAATC GAAAAGGCCA ACTTTCGGTT GACCTTGATC ATCCCTACCG TCTTCTCTTC
AAGCCGGATC AGGACCCATT GCCGGAGAAA CCGGAAGGCG GACTCGACTG GGGTAAGGTG
AGTTCAATTG AAATTCTCGG TGTGGAGGAT ACGCATGGGT AG
|
|---|
| Protein sequence | MMDILFRSKK FAKECNQQEL LVKRHGAQRA KLIRRRLDEL RAAANLEVMR ALPQARCHEL
KGNRKGQLSV DLDHPYRLLF KPDQDPLPEK PEGGLDWGKV SSIEILGVED THG
|
|---|
| |