9 homologs were found in PanDaTox collection
for query gene Pnap_4229 on replicon NC_008757
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008757  Pnap_4229  hypothetical protein  100 
 
 
407 aa  791    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.776633  normal 
 
 
-
 
NC_008786  Veis_3708  hypothetical protein  38.69 
 
 
391 aa  199  7.999999999999999e-50  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0451943  normal 
 
 
-
 
NC_007972  Rmet_6307  hypothetical protein  27.46 
 
 
350 aa  47.4  0.0005  Cupriavidus metallidurans CH34  Bacteria  normal  0.689131  normal 
 
 
-
 
NC_002978  WD0856  hypothetical protein  22.22 
 
 
795 aa  45.4  0.002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2439  TrbL/VirB6 plasmid conjugal transfer protein  32.94 
 
 
386 aa  45.4  0.002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.589519 
 
 
-
 
NC_010682  Rpic_1520  hypothetical protein  29.63 
 
 
356 aa  44.7  0.003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5185  TrbL/VirB6 plasmid conjugal transfer protein  29.63 
 
 
356 aa  44.7  0.003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011775  BCG9842_0176  hypothetical protein  26.49 
 
 
1562 aa  43.9  0.005  Bacillus cereus G9842  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0868  TrbL/VirB6 plasmid conjugal transfer protein  28.92 
 
 
345 aa  43.9  0.006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
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