Gene Veis_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3708 
Symbol 
ID4695258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4101413 
End bp4102588 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content59% 
IMG OID639851463 
Producthypothetical protein 
Protein accessionYP_998441 
Protein GI121610634 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3704] Type IV secretory pathway, VirB6 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0451943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTTG GCAAAGGAAA ATCCGCTGTC TGGCCATTGG CGCTGTCGAT GATTTCGGGC 
GGTGCATATG CGCAAGGGCA AGAACCAGGC CCTGCCGATT CGTTGGTTTT CATTGCCGAC
ATCATCAACT CCATCCTTGG GAAAAACCTG ATTCAACTCT TTGTCGATTC GGCAATGACG
ATTGCGGACA AGCTCGATCC CCTGGCGATG GGGTTGGCGG CCGGGCTGGC GCTGATTGCC
ATGCTGTGGG CATTGCTGGT GGCGATGATC GACAAGAGTT CGGCGCTGAC AGCGATGGTC
GAGCCGCTGA TTTTTGCCGT GCTGACGGCG CTCCTGCTGG CCAATTACGG CATGCTCGTC
AACGATATCG TCCAGCTCGG GCAGGAGGTC ATCGAGGTCA CCGGAAAAAG CGTGGGGGAG
GCATTCATGG GTTTCGTGAA TGTGTTTCTG AGGACGTTTT CCAAAATGTT TGCCGCAAGT
GTGAAAGAGG CGGGATTTAC CCTCAAATTT GCAGAAGTGC TTGGTGAAAT GCTGATCACC
CTGCTGTTTC TGGCCATCGC TTTTGTTTTC ATTTTGCTGG CCTGCAAGGA GTTGATCGGC
GTGTTTCTGA TTGGCCCGGT GGCCCTGGGG ATTGGCGTTG CGCTCGGGCC GCTGTTCATC
GCCACCCTGC CACTGCCCAA AACCCGCAGA TGGCTCGATC AATGGCTGAA TTTCCTGATC
AACGCCGCCA TGCTCACGGC CCTTGCAATC ATTGCGATGG TGTTGGTGCA GGAACTGGTC
ATCGATGTGG CGGACAAGTT TCAAACCCCG AACGACAAGG CAACCATTGG CAAGGCCATC
GCCATTGCCC TGGTGGCGGC CGGGCTGGGC AAGGTGTTCA GTGCGATTCC CGGATTCGCC
GACGCGCTGC TGCCCGGGCG CACGGGTGCT GGCAATGCCA TGAGTGGCAA GGCTGGCGAA
GGTGTGGCCA ATGCGGTGAA AGGCGCAGGC GCCATGGCCG CTGGTGCCAT GGCAGCCGCT
GGTGCGGGTT CCGTGATGTC GAGAGTGGGC GGCGCAATGG GTAGCGCAAT GGGCAGCGCC
GCGCAGGCCG GCTTTGATCG CGGCTCGGCC GGAGGCGGTG AGGCCAAGCA GGCCATCAGG
CAGGCGGCTG ATTTGACGGA TGGCGCGCAG AAGTGA
 
Protein sequence
MGVGKGKSAV WPLALSMISG GAYAQGQEPG PADSLVFIAD IINSILGKNL IQLFVDSAMT 
IADKLDPLAM GLAAGLALIA MLWALLVAMI DKSSALTAMV EPLIFAVLTA LLLANYGMLV
NDIVQLGQEV IEVTGKSVGE AFMGFVNVFL RTFSKMFAAS VKEAGFTLKF AEVLGEMLIT
LLFLAIAFVF ILLACKELIG VFLIGPVALG IGVALGPLFI ATLPLPKTRR WLDQWLNFLI
NAAMLTALAI IAMVLVQELV IDVADKFQTP NDKATIGKAI AIALVAAGLG KVFSAIPGFA
DALLPGRTGA GNAMSGKAGE GVANAVKGAG AMAAGAMAAA GAGSVMSRVG GAMGSAMGSA
AQAGFDRGSA GGGEAKQAIR QAADLTDGAQ K