9 homologs were found in PanDaTox collection
for query gene Pmen_0896 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_0896  hypothetical protein  100 
 
 		 320 aa  655    Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_57640  hypothetical protein  78.37 
 
 		 320 aa  509  1e-143  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.842673 
 
 
-
 
NC_009656  PSPA7_5009  hypothetical protein  76.88 
 
 		 320 aa  499  1e-140  Pseudomonas aeruginosa PA7  Bacteria  normal  0.26396  n/a   
 
 
-
 
NC_012791  Vapar_0348  hypothetical protein  29.62 
 
 		 280 aa  100  4e-20  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3530  hypothetical protein  32.87 
 
 		 258 aa  99.4  7e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.475769  n/a   
 
 
-
 
NC_008825  Mpe_A0824  hypothetical protein  27.55 
 
 		 261 aa  92.4  8e-18  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4026  hypothetical protein  29.78 
 
 		 257 aa  90.1  5e-17  Polaromonas sp. JS666  Bacteria  normal  0.452989  normal  0.508941 
 
 
-
 
NC_008781  Pnap_3497  hypothetical protein  26.57 
 
 		 268 aa  88.2  2e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.798864 
 
 
-
 
NC_008752  Aave_4168  hypothetical protein  28.46 
 
 		 258 aa  71.6  0.00000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.106721 
 
 
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