5 homologs were found in PanDaTox collection
for query gene Plav_2322 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_2322  TetR family transcriptional regulator  100 
 
 
184 aa  372  1e-102  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.00478637 
 
 
-
 
NC_013131  Caci_6717  transcriptional regulator, TetR family  28.7 
 
 
195 aa  42.7  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.477187  normal 
 
 
-
 
NC_014210  Ndas_3983  transcriptional regulator, TetR family  36.36 
 
 
200 aa  42.4  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3280  TetR family transcriptional regulator  28 
 
 
206 aa  42  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0233273  n/a   
 
 
-
 
NC_008688  Pden_4802  TetR family transcriptional regulator  30.25 
 
 
199 aa  41.6  0.006  Paracoccus denitrificans PD1222  Bacteria  normal  0.386552  normal  0.120275 
 
 
-
 
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