Gene Caci_6717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6717 
Symbol 
ID8338081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp7746668 
End bp7747255 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID644959811 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003117404 
Protein GI256395840 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.477187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC AGGAGACCAA GGCGCGCATC CTCGCCGCCG CGTTCCAGGA GTTCGCCGAA 
TACGGCGTGG CCGGCGCGCG GGTGGACCGC ATAGCGAAGA ACGCGGCGTG TAACAAGAAC 
CTGATTTACG TCTACTTCGC CAGCAAAGAG AACCTTTTCG CGACGGTTCT CGACCACCAC 
CTCGCCGACG CCTACGCCGG ACTGGAGTTC ACCCCCCAGA ACCTCCCCGA CCTGACCCGG 
CGCGTCTTCG ACTACGTCCA AGCCAACCCG GACGTCTATC GCCTCCTGGC GTGGGCCACC 
CTGGAGCGCA CCGCGGCACG CCCGCCCGCC CGCGCCCGCG AGCACGACCG CAAGATCCCC 
CTGATCCGCG ACGAGCAGAC GTCAGGGACG GTGGACGGCG CGCTCCCGCC CGAGCTGATC 
CTGATGGCGG TCATGGCGCT GGCGACGGCG TGGTCCCCGG CGTTCCCGTT CGGCGCCACC 
GCGAATCCGG GCACGTCGTT GGAGCCCGCG GTCATCCGCG AAGCGGTCGG CGAGATGGTC 
GAACGGATCG TGCGGCCGGC ACCGGCTCAG GAGAGCTCAC AGAGGTAG
 
Protein sequence
MAAQETKARI LAAAFQEFAE YGVAGARVDR IAKNAACNKN LIYVYFASKE NLFATVLDHH 
LADAYAGLEF TPQNLPDLTR RVFDYVQANP DVYRLLAWAT LERTAARPPA RAREHDRKIP 
LIRDEQTSGT VDGALPPELI LMAVMALATA WSPAFPFGAT ANPGTSLEPA VIREAVGEMV 
ERIVRPAPAQ ESSQR