More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_4943 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4780  acyl-CoA dehydrogenase domain-containing protein  87.91 
 
 
550 aa  988    Pseudomonas putida KT2440  Bacteria  normal  0.303527  hitchhiker  0.00591476 
 
 
-
 
NC_009439  Pmen_3764  acyl-CoA dehydrogenase domain-containing protein  83.92 
 
 
549 aa  961    Pseudomonas mendocina ymp  Bacteria  normal  0.598594  normal  0.0554036 
 
 
-
 
NC_010501  PputW619_0640  acyl-CoA dehydrogenase domain-containing protein  88.83 
 
 
559 aa  999    Pseudomonas putida W619  Bacteria  normal  0.749852  normal 
 
 
-
 
NC_012560  Avin_09290  acyl-CoA dehydrogenase  74.22 
 
 
571 aa  837    Azotobacter vinelandii DJ  Bacteria  normal  0.142361  n/a   
 
 
-
 
NC_007005  Psyr_4338  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  85.19 
 
 
549 aa  993    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4943  Acyl-CoA dehydrogenase-like  100 
 
 
549 aa  1139    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4656  acyl-CoA dehydrogenase domain-containing protein  87.91 
 
 
550 aa  988    Pseudomonas putida F1  Bacteria  normal  normal  0.216664 
 
 
-
 
NC_010322  PputGB1_4834  acyl-CoA dehydrogenase domain-containing protein  88.1 
 
 
550 aa  991    Pseudomonas putida GB-1  Bacteria  normal  0.938262  normal 
 
 
-
 
NC_009656  PSPA7_1136  putative acyl-CoA dehydrogenase  82.82 
 
 
549 aa  956    Pseudomonas aeruginosa PA7  Bacteria  normal  0.113236  n/a   
 
 
-
 
NC_007908  Rfer_0523  acyl-CoA dehydrogenase-like  60.55 
 
 
562 aa  677    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_12450  putative acyl-CoA dehydrogenase  83 
 
 
549 aa  959    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.744649  normal 
 
 
-
 
NC_008740  Maqu_3582  acyl-CoA dehydrogenase domain-containing protein  62.45 
 
 
563 aa  698    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0592  acyl-CoA dehydrogenase domain protein  58.27 
 
 
555 aa  633  1e-180  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.684564  n/a   
 
 
-
 
NC_008340  Mlg_1719  acyl-CoA dehydrogenase domain-containing protein  59.19 
 
 
559 aa  621  1e-176  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.447043 
 
 
-
 
NC_009719  Plav_2837  acyl-CoA dehydrogenase domain-containing protein  53.65 
 
 
563 aa  583  1.0000000000000001e-165  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.218018  normal 
 
 
-
 
NC_011071  Smal_2958  acyl-CoA dehydrogenase domain protein  56.01 
 
 
545 aa  567  1e-160  Stenotrophomonas maltophilia R551-3  Bacteria  hitchhiker  0.000179146  hitchhiker  0.0000711281 
 
 
-
 
NC_013739  Cwoe_5281  acyl-CoA dehydrogenase domain protein  54.16 
 
 
550 aa  558  1e-158  Conexibacter woesei DSM 14684  Bacteria  normal  0.656776  normal 
 
 
-
 
NC_011138  MADE_00944  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.98 
 
 
560 aa  555  1e-157  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.874747  n/a   
 
 
-
 
NC_013595  Sros_6703  acyl-CoA dehydrogenase  53.79 
 
 
539 aa  549  1e-155  Streptosporangium roseum DSM 43021  Bacteria  normal  0.619428  normal  0.598505 
 
 
-
 
NC_008228  Patl_3912  acyl-CoA dehydrogenase-like  52.69 
 
 
548 aa  547  1e-154  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.0000271467  n/a   
 
 
-
 
NC_009953  Sare_4366  acyl-CoA dehydrogenase domain-containing protein  53.31 
 
 
542 aa  545  1e-153  Salinispora arenicola CNS-205  Bacteria  normal  0.128811  hitchhiker  0.00458691 
 
 
-
 
NC_008146  Mmcs_0975  acyl-CoA dehydrogenase-like protein  52.65 
 
 
551 aa  542  1e-153  Mycobacterium sp. MCS  Bacteria  normal  0.315485  n/a   
 
 
-
 
NC_013159  Svir_38660  acyl-CoA dehydrogenase  52.49 
 
 
548 aa  545  1e-153  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10686  acyl-CoA dehydrogenase fadE8  51.45 
 
 
542 aa  542  1e-153  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0993  acyl-CoA dehydrogenase domain-containing protein  52.65 
 
 
551 aa  542  1e-153  Mycobacterium sp. KMS  Bacteria  normal  normal  0.619354 
 
 
-
 
NC_014165  Tbis_2251  acyl-CoA dehydrogenase domain-containing protein  54.34 
 
 
534 aa  541  9.999999999999999e-153  Thermobispora bispora DSM 43833  Bacteria  normal  0.141599  normal  0.0458056 
 
 
-
 
NC_009380  Strop_3981  acyl-CoA dehydrogenase domain-containing protein  53.49 
 
 
542 aa  541  9.999999999999999e-153  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1003  acyl-CoA dehydrogenase domain-containing protein  52.08 
 
 
551 aa  539  9.999999999999999e-153  Mycobacterium sp. JLS  Bacteria  normal  normal  0.265858 
 
 
-
 
NC_009338  Mflv_5086  acyl-CoA dehydrogenase domain-containing protein  52.54 
 
 
552 aa  538  9.999999999999999e-153  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.480357  normal  0.429273 
 
 
-
 
NC_008726  Mvan_1269  acyl-CoA dehydrogenase domain-containing protein  52.21 
 
 
551 aa  536  1e-151  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.934265 
 
 
-
 
NC_014210  Ndas_2819  acyl-CoA dehydrogenase domain protein  53.04 
 
 
543 aa  530  1e-149  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.708717  normal  0.776174 
 
 
-
 
NC_013510  Tcur_1782  acyl-CoA dehydrogenase domain protein  52.83 
 
 
543 aa  526  1e-148  Thermomonospora curvata DSM 43183  Bacteria  normal  0.121975  n/a   
 
 
-
 
NC_013131  Caci_1752  acyl-CoA dehydrogenase domain protein  52.58 
 
 
550 aa  526  1e-148  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.907741  normal 
 
 
-
 
NC_007951  Bxe_A0173  Acyl-CoA dehydrogenase  49.82 
 
 
561 aa  520  1e-146  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3763  acyl-CoA dehydrogenase domain protein  48.93 
 
 
561 aa  513  1e-144  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.75018 
 
 
-
 
NC_013441  Gbro_4257  acyl-CoA dehydrogenase domain protein  50.09 
 
 
559 aa  509  1e-143  Gordonia bronchialis DSM 43247  Bacteria  normal  0.175294  n/a   
 
 
-
 
NC_009074  BURPS668_0215  acyl-CoA dehydrogenase domain-containing protein  48.73 
 
 
559 aa  502  1e-141  Burkholderia pseudomallei 668  Bacteria  normal  0.389081  n/a   
 
 
-
 
NC_009076  BURPS1106A_0227  acyl-CoA dehydrogenase domain-containing protein  48.91 
 
 
559 aa  504  1e-141  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6225  acyl-CoA dehydrogenase domain protein  52.5 
 
 
529 aa  502  1e-141  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0410  Acyl-CoA dehydrogenase  48.55 
 
 
559 aa  501  1e-140  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0193  acyl-CoA dehydrogenase domain-containing protein  48.29 
 
 
559 aa  499  1e-140  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5650  acyl-CoA dehydrogenase domain-containing protein  50.37 
 
 
542 aa  497  1e-139  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.108739  normal  0.35349 
 
 
-
 
NC_009921  Franean1_6434  acyl-CoA dehydrogenase domain-containing protein  49.82 
 
 
572 aa  497  1e-139  Frankia sp. EAN1pec  Bacteria  normal  0.441597  normal  0.0443202 
 
 
-
 
NC_011992  Dtpsy_0100  acyl-CoA dehydrogenase domain protein  49.09 
 
 
551 aa  492  9.999999999999999e-139  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3817  acyl-CoA dehydrogenase  48.16 
 
 
548 aa  493  9.999999999999999e-139  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2938  acyl-CoA dehydrogenase-like  48.44 
 
 
550 aa  493  9.999999999999999e-139  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0117  acyl-CoA dehydrogenase domain-containing protein  48.44 
 
 
550 aa  493  9.999999999999999e-139  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2353  acyl-CoA dehydrogenase domain-containing protein  50.55 
 
 
557 aa  494  9.999999999999999e-139  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0116  acyl-CoA dehydrogenase domain-containing protein  48.9 
 
 
550 aa  491  1e-137  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2924  acyl-CoA dehydrogenase domain-containing protein  48.91 
 
 
557 aa  490  1e-137  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0131  acyl-CoA dehydrogenase domain-containing protein  48.26 
 
 
550 aa  491  1e-137  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0369  acyl-CoA dehydrogenase-like  50.46 
 
 
561 aa  489  1e-137  Frankia sp. CcI3  Bacteria  normal  normal  0.165313 
 
 
-
 
NC_014158  Tpau_1017  acyl-CoA dehydrogenase domain protein  48.45 
 
 
549 aa  489  1e-137  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0081  acyl-CoA dehydrogenase domain-containing protein  49.09 
 
 
551 aa  491  1e-137  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0161  acyl-CoA dehydrogenase-like protein  47.36 
 
 
561 aa  478  1e-134  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1847  acyl-CoA dehydrogenase domain-containing protein  48.9 
 
 
550 aa  478  1e-134  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.440141  normal  0.493968 
 
 
-
 
NC_012791  Vapar_2916  acyl-CoA dehydrogenase domain protein  48.91 
 
 
546 aa  476  1e-133  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2695  acyl-CoA dehydrogenase domain protein  48.04 
 
 
545 aa  474  1e-132  Conexibacter woesei DSM 14684  Bacteria  normal  0.682945  normal  0.378302 
 
 
-
 
NC_004311  BRA0598  acyl-CoA dehydrogenase family protein  51.03 
 
 
551 aa  474  1e-132  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0562  acyl-CoA dehydrogenase family protein  51.03 
 
 
551 aa  474  1e-132  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3639  acyl-CoA dehydrogenase domain protein  46.62 
 
 
553 aa  472  1e-132  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3297  Acyl-CoA dehydrogenase  47.16 
 
 
550 aa  467  9.999999999999999e-131  Burkholderia sp. 383  Bacteria  normal  0.165535  normal 
 
 
-
 
NC_012856  Rpic12D_3316  acyl-CoA dehydrogenase domain protein  46.07 
 
 
553 aa  466  9.999999999999999e-131  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0107  acyl-CoA dehydrogenase domain-containing protein  48.26 
 
 
550 aa  465  9.999999999999999e-131  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0204  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.65 
 
 
553 aa  461  9.999999999999999e-129  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2564  acyl-CoA dehydrogenase-like  47.68 
 
 
579 aa  459  9.999999999999999e-129  Polaromonas sp. JS666  Bacteria  normal  normal  0.375383 
 
 
-
 
NC_008786  Veis_2832  acyl-CoA dehydrogenase domain-containing protein  47.23 
 
 
559 aa  460  9.999999999999999e-129  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.716167  normal  0.258614 
 
 
-
 
NC_009076  BURPS1106A_4029  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
546 aa  456  1e-127  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2968  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
546 aa  456  1e-127  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1573  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
546 aa  456  1e-127  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3342  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
546 aa  456  1e-127  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0117  acyl-CoA dehydrogenase domain-containing protein  47.34 
 
 
550 aa  456  1e-127  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_3029  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
546 aa  456  1e-127  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3955  acyl-CoA dehydrogenase domain-containing protein  48.62 
 
 
546 aa  454  1.0000000000000001e-126  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0160  acyl-CoA dehydrogenase  48.62 
 
 
546 aa  454  1.0000000000000001e-126  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1360  acyl-CoA dehydrogenase-like  48.9 
 
 
543 aa  452  1.0000000000000001e-126  Chelativorans sp. BNC1  Bacteria  normal  0.165599  n/a   
 
 
-
 
NC_009485  BBta_4724  isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation damage)  52.91 
 
 
547 aa  449  1e-125  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0120  acyl-CoA dehydrogenase domain-containing protein  46.08 
 
 
564 aa  446  1.0000000000000001e-124  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3665  acyl-CoA dehydrogenase domain-containing protein  50.61 
 
 
530 aa  447  1.0000000000000001e-124  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3298  acyl-CoA dehydrogenase domain-containing protein  48.62 
 
 
546 aa  442  1e-123  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0121  putative oxidoreductase flavoprotein FAD  46.92 
 
 
557 aa  438  1e-121  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2427  Acyl-CoA dehydrogenase-like  50.87 
 
 
549 aa  436  1e-121  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0516258 
 
 
-
 
NC_007963  Csal_2827  acyl-CoA dehydrogenase-like protein  45.97 
 
 
550 aa  436  1e-121  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.952078  n/a   
 
 
-
 
NC_007958  RPD_3025  acyl-CoA dehydrogenase-like  51.24 
 
 
551 aa  432  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.285589  normal  0.509442 
 
 
-
 
NC_011004  Rpal_3525  acyl-CoA dehydrogenase domain protein  51.91 
 
 
549 aa  430  1e-119  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.00283782  n/a   
 
 
-
 
NC_010511  M446_2109  acyl-CoA dehydrogenase domain-containing protein  47.24 
 
 
538 aa  430  1e-119  Methylobacterium sp. 4-46  Bacteria  normal  0.839474  normal  0.02273 
 
 
-
 
NC_007925  RPC_2252  acyl-CoA dehydrogenase-like  50.65 
 
 
549 aa  429  1e-119  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.459209 
 
 
-
 
NC_010465  YPK_3788  isovaleryl CoA dehydrogenase  45.19 
 
 
547 aa  429  1e-119  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0687  isovaleryl CoA dehydrogenase  45.19 
 
 
547 aa  429  1e-119  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3643  isovaleryl CoA dehydrogenase  45.19 
 
 
547 aa  429  1e-119  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2281  acyl-CoA dehydrogenase-like  47.41 
 
 
547 aa  428  1e-118  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2006  acyl-CoA dehydrogenase  48.07 
 
 
546 aa  420  1e-116  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.315966  normal  0.474092 
 
 
-
 
NC_011989  Avi_1763  acyl-CoA dehydrogenase  44.32 
 
 
547 aa  421  1e-116  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0937  acyl-CoA dehydrogenase domain-containing protein  46.12 
 
 
550 aa  420  1e-116  Sinorhizobium medicae WSM419  Bacteria  normal  0.0783205  normal  0.320955 
 
 
-
 
NC_008786  Veis_2218  acyl-CoA dehydrogenase domain-containing protein  43.34 
 
 
568 aa  421  1e-116  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.192858  normal  0.322981 
 
 
-
 
NC_011894  Mnod_1083  acyl-CoA dehydrogenase domain protein  48.17 
 
 
538 aa  415  9.999999999999999e-116  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0440  isovaleryl CoA dehydrogenase  48.38 
 
 
544 aa  418  9.999999999999999e-116  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.00000763646 
 
 
-
 
NC_009800  EcHS_A4431  isovaleryl CoA dehydrogenase  45.42 
 
 
541 aa  413  1e-114  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5703  isovaleryl CoA dehydrogenase  45.42 
 
 
541 aa  412  1e-114  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0144  acyl-CoA dehydrogenase domain-containing protein  45.09 
 
 
555 aa  412  1e-114  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00906327 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>