26 homologs were found in PanDaTox collection
for query gene Patl_3013 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_3013  sodium pump decarboxylases, gamma subunit  100 
 
 		 109 aa  222  1e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0628711  n/a   
 
 
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NC_009092  Shew_1219  sodium pump decarboxylases, gamma subunit  44.87 
 
 		 82 aa  63.9  0.0000000007  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000225864  normal  1 
 
 
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NC_002977  MCA2481  oxaloacetate decarboxylase, gamma subunit  33.71 
 
 		 85 aa  55.5  0.0000002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
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NC_010506  Swoo_3337  sodium pump decarboxylase, gamma subunit  38.46 
 
 		 81 aa  53.1  0.000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.0000602904 
 
 
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NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  35.71 
 
 		 83 aa  52  0.000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
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NC_008322  Shewmr7_3069  sodium pump decarboxylases, gamma subunit  38.64 
 
 		 85 aa  52.4  0.000002  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.692299 
 
 
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NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  38.27 
 
 		 85 aa  52.8  0.000002  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
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NC_008577  Shewana3_3166  sodium pump decarboxylases, gamma subunit  39.53 
 
 		 85 aa  51.6  0.000003  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
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NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  37.04 
 
 		 92 aa  51.2  0.000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_011663  Sbal223_3267  sodium pump decarboxylase, gamma subunit  38.1 
 
 		 88 aa  48.9  0.00002  Shewanella baltica OS223  Bacteria  normal  1  normal  0.0150987 
 
 
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NC_009052  Sbal_1024  sodium pump decarboxylase, gamma subunit  36.9 
 
 		 100 aa  48.9  0.00002  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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NC_003910  CPS_1048  oxaloacetate decarboxylase, gamma subunit  37.04 
 
 		 92 aa  48.9  0.00002  Colwellia psychrerythraea 34H  Bacteria  normal  0.299241  n/a   
 
 
-
 
NC_008321  Shewmr4_2987  sodium pump decarboxylases, gamma subunit  39.58 
 
 		 95 aa  48.5  0.00003  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.809625 
 
 
-
 
NC_009438  Sputcn32_1029  sodium pump decarboxylase, gamma subunit  41.77 
 
 		 88 aa  48.5  0.00003  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  39.29 
 
 		 83 aa  48.5  0.00003  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
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NC_009831  Ssed_1320  sodium pump decarboxylase, gamma subunit  35.9 
 
 		 98 aa  48.1  0.00004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.219843  hitchhiker  0.0088654 
 
 
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NC_009665  Shew185_1091  sodium pump decarboxylase, gamma subunit  36.9 
 
 		 88 aa  47.4  0.00006  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
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NC_009997  Sbal195_1125  sodium pump decarboxylase, gamma subunit  36.9 
 
 		 88 aa  47.4  0.00007  Shewanella baltica OS195  Bacteria  normal  0.65585  normal  1 
 
 
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NC_009901  Spea_1198  sodium pump decarboxylase, gamma subunit  35.9 
 
 		 81 aa  46.2  0.0002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0495339  n/a   
 
 
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NC_011138  MADE_02842  putative oxaloacetate decarboxylase subunit gamma  41.18 
 
 		 68 aa  46.2  0.0002  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00149059  n/a   
 
 
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NC_008709  Ping_3377  oxaloacetate decarboxylase subunit gamma  40.48 
 
 		 82 aa  44.7  0.0004  Psychromonas ingrahamii 37  Bacteria  normal  0.0177539  normal  1 
 
 
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NC_008576  Mmc1_3195  sodium pump decarboxylases, gamma subunit  38.64 
 
 		 81 aa  43.9  0.0008  Magnetococcus sp. MC-1  Bacteria  normal  0.139992  normal  1 
 
 
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NC_009439  Pmen_2894  sodium pump decarboxylase, gamma subunit  32.99 
 
 		 98 aa  42.4  0.002  Pseudomonas mendocina ymp  Bacteria  normal  0.11111  normal  0.988078 
 
 
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NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  36.14 
 
 		 80 aa  42  0.003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
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NC_013512  Sdel_0603  sodium pump decarboxylase gamma subunit  34.52 
 
 		 81 aa  42  0.003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.477522  n/a   
 
 
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NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  34.62 
 
 		 83 aa  40.4  0.009  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
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