9 homologs were found in PanDaTox collection
for query gene PICST_41057 on replicon NC_009042
Organism: Scheffersomyces stipitis CBS 6054



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009042  PICST_41057  endosomal Vps protein complex subunit  100 
 
 
206 aa  410  1e-114  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.803501  normal 
 
 
-
 
BN001301  ANIA_06920  SNF7 family protein (AFU_orthologue; AFUA_5G13890)  41.86 
 
 
228 aa  125  4.0000000000000003e-28  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.99025  normal 
 
 
-
 
NC_006670  CNA04070  late endosome to vacuole transport-related protein, putative  37.64 
 
 
384 aa  105  3e-22  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.744482  n/a   
 
 
-
 
NC_009374  OSTLU_8048  predicted protein  37.25 
 
 
143 aa  70.1  0.00000000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_009047  PICST_63022  class E vacuolar-protein sorting and endocytosis factor  30.56 
 
 
232 aa  58.2  0.00000009  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
BN001301  ANIA_06898  SNF7 family protein (AFU_orthologue; AFUA_5G13410)  28.35 
 
 
226 aa  54.3  0.000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.995275  normal  0.591015 
 
 
-
 
NC_011687  PHATRDRAFT_5904  predicted protein  25.71 
 
 
206 aa  54.3  0.000001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.476575  n/a   
 
 
-
 
NC_006693  CNH01380  conserved hypothetical protein  25.2 
 
 
314 aa  49.3  0.00004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0679867  n/a   
 
 
-
 
NC_011689  PHATRDRAFT_6433  predicted protein  28.8 
 
 
143 aa  44.3  0.001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
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