Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5904 |
Symbol | |
ID | 7195093 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 209593 |
End bp | 210292 |
Gene Length | 700 bp |
Protein Length | 206 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183441 |
Protein GI | 219126389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.476575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATG TATGGGGCCG AGATAAACCA TTAAAGGAGG TTCTGCGGGA GAACAAGCGC ATGATAAATA GGGCGGTCCG AGAGCTGGAT CGAGAGAAGG CTGGACTTGA AAGGGAAGAA AAACGTTTGA CGATTGAGAT CAAAAAGGCG GCGAAGGAAA ACCAAATGCA GTCTGTGAAA ATCATGGCTA AGGTATGTGT ATCTTTACGA ACGTGTGGCG TGGTAGTCTG GTAGTGGCTG CATAACTGAC CAAATGTTGC TGTGGTGCTC CCAGGATCTG GTGAGGACGC GACAATATAT TACCAAATTT ATTGAAATGC GATCGCATTT GCAAGGATGC GCTCTGAAAC TTCAGACCGT CAAATCTCAC CAAGCAATGG CAGAAGCTAT GCAAAATACT GCAAAGGCTA TGGGGAAAAT GAACAAAGCC GTCAACGTCC CCACGATCAC GAAAATGATG GCAGAGTTTG AAAAGGAAAA TGCACGCACT GATATGATGC AAGAAGTAAT GGGCGACGCT ATCGATGATG CGTTAGAAGG TGAAGGGACC GAGGAGGAAG AAGACAGGAT TGTCGGTCAA GTTTTGGATG AAATTGGCAT CACATTCGGA GAAGAATTGC CCGCGACGGC TGGATTGACG GTACCGACGA ATGGTGTGGC TGAAGGCCCG ACGAAGGTAG CTGCTGTTGC TGGAGGTGGA
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Protein sequence | MGNVWGRDKP LKEVLRENKR MINRAVRELD REKAGLEREE KRLTIEIKKA AKENQMQSVK IMAKDLVRTR QYITKFIEMR SHLQGCALKL QTVKSHQAMA EAMQNTAKAM GKMNKAVNVP TITKMMAEFE KENARTDMMQ EVMGDAIDDA LEGEGTEEEE DRIVGQVLDE IGITFGEELP ATAGLTVPTN GVAEGPTKVA AVAGGG
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