Gene PHATRDRAFT_5904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5904 
Symbol 
ID7195093 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp209593 
End bp210292 
Gene Length700 bp 
Protein Length206 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183441 
Protein GI219126389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.476575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATG TATGGGGCCG AGATAAACCA TTAAAGGAGG TTCTGCGGGA GAACAAGCGC 
ATGATAAATA GGGCGGTCCG AGAGCTGGAT CGAGAGAAGG CTGGACTTGA AAGGGAAGAA
AAACGTTTGA CGATTGAGAT CAAAAAGGCG GCGAAGGAAA ACCAAATGCA GTCTGTGAAA
ATCATGGCTA AGGTATGTGT ATCTTTACGA ACGTGTGGCG TGGTAGTCTG GTAGTGGCTG
CATAACTGAC CAAATGTTGC TGTGGTGCTC CCAGGATCTG GTGAGGACGC GACAATATAT
TACCAAATTT ATTGAAATGC GATCGCATTT GCAAGGATGC GCTCTGAAAC TTCAGACCGT
CAAATCTCAC CAAGCAATGG CAGAAGCTAT GCAAAATACT GCAAAGGCTA TGGGGAAAAT
GAACAAAGCC GTCAACGTCC CCACGATCAC GAAAATGATG GCAGAGTTTG AAAAGGAAAA
TGCACGCACT GATATGATGC AAGAAGTAAT GGGCGACGCT ATCGATGATG CGTTAGAAGG
TGAAGGGACC GAGGAGGAAG AAGACAGGAT TGTCGGTCAA GTTTTGGATG AAATTGGCAT
CACATTCGGA GAAGAATTGC CCGCGACGGC TGGATTGACG GTACCGACGA ATGGTGTGGC
TGAAGGCCCG ACGAAGGTAG CTGCTGTTGC TGGAGGTGGA
 
Protein sequence
MGNVWGRDKP LKEVLRENKR MINRAVRELD REKAGLEREE KRLTIEIKKA AKENQMQSVK 
IMAKDLVRTR QYITKFIEMR SHLQGCALKL QTVKSHQAMA EAMQNTAKAM GKMNKAVNVP
TITKMMAEFE KENARTDMMQ EVMGDAIDDA LEGEGTEEEE DRIVGQVLDE IGITFGEELP
ATAGLTVPTN GVAEGPTKVA AVAGGG