Gene CNH01380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01380 
Symbol 
ID3259275 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp782637 
End bp783953 
Gene Length1317 bp 
Protein Length314 aa 
Translation table 
GC content47% 
IMG OID638258345 
Productconserved hypothetical protein 
Protein accessionXP_572326 
Protein GI58270340 
COG category[N] Cell motility 
COG ID[COG5491] Conserved protein implicated in secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0679867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCAG GTGCATTTGG TTCCGCAGCT CCCCCTTTAG TTGTTGCCGG CCACGATGAC 
GGCTATCCTT CCGACATCTT ATCGTGCATC CATCCATCTC TCACTTTTAT CCGTTCTCGA
CCCATAGCAC CTGATCTGTC ATTGTTTATC CTGTCCAAGA GCATTTCTAT CTTGCACTCA
GCATCCACCA TGAACATCCT TGTGAGTCCG AGACTCCAGA GTCAATCCAC AATGCGTTTA
CATGCTGATA ACCCCGCCAG GACACCTTAT TTGGTCGGTC TATGACTCCA GCAGAACGGC
TGAGACAACA TCAAAGGTCC CTTCAGAAAG CGCAACGAGA GCTGGAGAGA GAAAAGGGGA
AACTGGAGGC TCAGGAGAAG AAGACAATGG CGGACATTAA ACGAAATGCG AAAGCTGGGA
ACATGGTGCG TGTGGGCGTC CCACCAAAGT CAAAGCGAAA GCTGATCAAG CGGTATGGTG
ATCCAGAATG CCTGCAAAAT TCTTGCTAAA GACCTCGTGC GAACACGAAG GTATATCCAA
AAGTTTACGC AGATGAGGGT GCAGCTGCAA GCGGTGTCAT TACGTATGCA GACACTGAGG
AGTAACGAGC AAATGGCTAC GGCGATGAAA GGTGCTACCA GGGTAAGCAA AATTTCATAT
ATCACTTGCA GAAGGAAAAT GAGACAGGGC TAATTGCTTG TACAGGCGAT GGGGCAAATG
AATAGGAGTT TGAATCTGCC GCAAGTAGGT GTCAAATACT TCCTCTTTGC TTCTGCGGCA
TGCTAATTAA TTCTGACACT TGGTACTATT TAGATCCAGA AGATCATGAA CGATTTCGAA
CGTGAATCTT CAACTATGGA TATGAAGGAA GAAATGATGT CCGATGCGGT TGATGATGCA
ATGGAGGATG AGGAGGAAGG TGAAGGTGAA GAAGTAGAAA GCGACAAAAT TCTCAAAGAG
GTGCTGGATG AAATTGGCAT GAACATGAAC GAATCGGTAA GTGACTTCAT TATTTACCCG
CTATTTCGGA TTTCAGGCTC AGGGTGCTGC GCTTTGAACC GATCGACTGG ACAACGCTAA
CATTTGTATT TTTTAATTAT TTTTTACTTA AAACAGCTTA TATCTGCACC CACTGCTTCT
CCGCTTGTTC CGGAACCATT GCAAGCTTCT CGAGTGGCCG TTGCAGAAGG TTTACCTTCA
TCAGCAGCTG CTGGCGGTCC AACAAATGTT GGAAATGGGG GAGTAGGGGC TGGCTCTGGT
ATGAGTTCCG AAGAAGCAGA CTTGCAACGA CGATTGGACG CTTTGAGGAG AGATTAG
 
Protein sequence
MSSGAFGSAA PPLVVAGHDD GYPSDILSCI HPSLTFIRSR PIAPDLSLFI LSKSISILHS 
ASTMNILDTL FGRSMTPAER LRQHQRSLQK AQRELEREKG KLEAQEKKTM ADIKRNAKAG
NMNACKILAK DLVRTRRYIQ KFTQMRVQLQ AVSLRMQTLR SNEQMATAMK GATRAMGQMN
RSLNLPQIQK IMNDFERESS TMDMKEEMMS DAVDDAMEDE EEGEGEEVES DKILKEVLDE
IGMNMNESLI SAPTASPLVP EPLQASRVAV AEGLPSSAAA GGPTNVGNGG VGAGSGMSSE
EADLQRRLDA LRRD