Gene PICST_63022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63022 
SymbolDID4 
ID4840660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp848416 
End bp849114 
Gene Length699 bp 
Protein Length232 aa 
Translation table12 
GC content47% 
IMG OID640391975 
Productclass E vacuolar-protein sorting and endocytosis factor 
Protein accessionXP_001386175 
Protein GI150866536 
COG category[N] Cell motility 
COG ID[COG5491] Conserved protein implicated in secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC TCTTTGAGTG GGCGTTTGGA AAGAAGCTCA CGCCGCAGGA GCGGCTTCGA 
AAAAACCAGC GAGCACTTGA AAAGACTCAG CGAGAGCTCA CACGAGAAGT GACCAAGCTT
CAGCAACAGG AGAAGAAGTT AATCAGCGAG ATCAAGAAGT CGGCCAAAGC TGGTCAAATC
AGCAGCGCCA AGATCCAGGC TAAGGATTTG ATTCGAACCA AGAACTATAT CGGCAAGTTT
AACTCGATGA AAGCGCAATT ACAGGCTATT TCACTTCGTA TCCAATCTGT AAGATCCAAC
CAGCAAATGG CCACCTCGAT GAGAGATGCA ACCCGTTTGC TTTCGGGAAT GAACCGGTCG
ATGAATTTGC CCCAGTTGTC GCGTATAGCC CAGGAGTTTG CTAAAGAAAA CGATCTTATG
GACCAGAAAC AGGAATTCAT GGATGATGCC ATTGACGATG CCATGGCTAT GGATGAAGAT
GAGTTGGGCG AGGATGAACA GATAGACGAA ATCTTGGGTA AAGTTCTCGA CGAAATCGGA
GTAGACTTGA ATACTAGTTT GAAGGAGACT CCTAACTCTA TCAATGTTCA TACTGAAGAG
AAGTTGAATT CCGGTAGAGT AGCCGAAGCT ATTGGTGGAG GAGGCGATCA CGCTGATGAG
GATGACTTGC AGGCGAGATT GGACAGTTTG AAGAAGTAG
 
Protein sequence
MSSLFEWAFG KKLTPQERLR KNQRALEKTQ RELTREVTKL QQQEKKLISE IKKSAKAGQI 
SSAKIQAKDL IRTKNYIGKF NSMKAQLQAI SLRIQSVRSN QQMATSMRDA TRLLSGMNRS
MNLPQLSRIA QEFAKENDLM DQKQEFMDDA IDDAMAMDED ELGEDEQIDE ILGKVLDEIG
VDLNTSLKET PNSINVHTEE KLNSGRVAEA IGGGGDHADE DDLQARLDSL KK