9 homologs were found in PanDaTox collection
for query gene PC1_3749 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_3749  hypothetical protein  100 
 
 		 552 aa  1140    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_2705  hypothetical protein  77.81 
 
 		 380 aa  610  1e-173  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0141568  n/a   
 
 
-
 
NC_004347  SO_0350  hypothetical protein  38.46 
 
 		 371 aa  214  2.9999999999999995e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3637  hypothetical protein  37.83 
 
 		 374 aa  204  3e-51  Shewanella putrefaciens CN-32  Bacteria  normal  0.181579  n/a   
 
 
-
 
NC_008322  Shewmr7_0321  hypothetical protein  35.08 
 
 		 382 aa  196  8.000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3819  hypothetical protein  36.65 
 
 		 371 aa  193  7e-48  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3622  hypothetical protein  37.07 
 
 		 254 aa  130  9.000000000000001e-29  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_3560  Protein of unknown function DUF1963  28.17 
 
 		 791 aa  76.3  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00826775  normal  0.0597462 
 
 
-
 
NC_008321  Shewmr4_3623  hypothetical protein  31.36 
 
 		 121 aa  64.7  0.000000004  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>