Gene Shewana3_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3819 
Symbol 
ID4480029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4585765 
End bp4586880 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content49% 
IMG OID639728432 
Producthypothetical protein 
Protein accessionYP_871443 
Protein GI117922251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGT TGTTAGCAGA AAATTCCCCC ATTCGTCAGC AGCTACTCGA GCAAAAGCTG 
GCACAGTTTA AAGACCCCAA GCTTGCCAAC GTTCTTTCGG CGTTTATTCG CAGTAGTGTC
GACCTCTATC CCTGTGCAGA CGAAGACTAT GCCCAGTTAG GTAACAGCCG ACTAGGTGGA
TTGCCAGATT TACCTGTCGG CATGGATTAT CCGGTGACTC TGGTTGGGCG ATTGGAGATG
CTGGATGCTT ACGCTGAGGA ATTCGACCAC ACTCGCGAGT ATATCGAGGA GCATTATTGC
TGGTCGCAGG ATTGGGACTG GGACGAGGCG GCGCAGGCCT TCCGTGTGCC GATGCAATTT
ATTGCACAGC TCAACTGTAG CGACCTGAAG GCGTTTCAAT CTTATTTGCC CCGAGAAGGG
CGATTGTTGT TCTTTTTGGA GCGCTGGCGA TTCTCGGAAA TGCTTCGCGG CCATGTCTAT
TATGTCGCTG AAGATCTGCT ACTGAAGTCT GGCAAAGCGA TTGCCGAACC TAAGTTCGAC
GATGCTGTAT GTGCAAACTA TGAGTATGAA GCGGCTTATC AACTTCAGGG AATAGCCAGC
ATTAAGATGA TAGCCACAGA CATGATTAAT AGTGACAACC CGCATTTATT AAAGTTAGCC
AAGGCCCGTT TACAAGCGCT ACCTGAACCG CAACAAGCTA TGGTGCTAGA GGCCCTAGCG
GTTGTGGATG ATGAATTGGT ACCTGAGTGG CAAGATCAGC TCAAGGGCTA TGAGCTGATA
CAATTGAATG AGCACGGGTT TATCCCTGGT CAGATTCTCA CTCAATCGCA ATGGGCTAAT
ACCGACTGGC AGTCATCCAA CTTTCGGGCA TTGCTGGTCC CCGAGCAGCC GCTGCCGTAT
TACAATGGTA TCGCCAGCAT TAATGGCCAT GGTGATAGCC GCTATAAAGC CCCCGAACTC
CACGCTGCGG CTGAATTAGG CGGCAATGCC GAAGATTATC TGGTGCTGTT CAAAGCCGTC
TATAGTGAGC ACTCGATGCA GTTGAATTTT ATTATCCACC GGGATGATTT AGCCTTAGGA
AAATTCGACC GCATTTACTG CATTTATGAC AACTAG
 
Protein sequence
MDMLLAENSP IRQQLLEQKL AQFKDPKLAN VLSAFIRSSV DLYPCADEDY AQLGNSRLGG 
LPDLPVGMDY PVTLVGRLEM LDAYAEEFDH TREYIEEHYC WSQDWDWDEA AQAFRVPMQF
IAQLNCSDLK AFQSYLPREG RLLFFLERWR FSEMLRGHVY YVAEDLLLKS GKAIAEPKFD
DAVCANYEYE AAYQLQGIAS IKMIATDMIN SDNPHLLKLA KARLQALPEP QQAMVLEALA
VVDDELVPEW QDQLKGYELI QLNEHGFIPG QILTQSQWAN TDWQSSNFRA LLVPEQPLPY
YNGIASINGH GDSRYKAPEL HAAAELGGNA EDYLVLFKAV YSEHSMQLNF IIHRDDLALG
KFDRIYCIYD N