Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3622 |
Symbol | |
ID | 4254186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4329615 |
End bp | 4330379 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120265 |
Product | hypothetical protein |
Protein accession | YP_735743 |
Protein GI | 113971950 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATTTA TTGCACAGCT CAACTGTAGC GACCTAAAGG CGTTTCAATC TTATTTGCCC CGAGAAGGGC GATTGTTGTT CTTTTTGGAG CGCTGGCGAT TCTCGGAAAT GCTTCGCGGC CATGTTTATT ATGTCGCTGA AGATCAGCAA CTAAAGTCTG GGAAAGCGAT TGCCGAACTT AAGTTCGACG ATGCTGTATG TGCAAACTAT GAGTATGAAG CGGCTTATCA ACTTCAGGGA ATTGCCAGCA TAAAGATGAT AGCCCCTGAC ATGATTAATA GTGACAACCC GCATTTAGTA AGGTTAGCCA AGGACCGTTT ACAAGCGCTA CCTGAACCGC AACAAGCTAT GGTGCTGGAG GCCCTAGCGG TTGTAGATGA TGAATTGGCA CCAGAGTGGC AAGATCAGCT CAAGGGCTAT GAGCTGATAC AATTGAATGT GCACGGGTTT ATCCCTGGTC AGATTCTCAC TCAATCGCAA TGGGCTAATA CCGACTGGCA GTCATCCAAC TTGCAGGCAT TGCTCGTCCC CGAGCAGCCG CTGCCGTATT ACAATGGTAT CGCCTGCATT AATGGCCATG GTGATAGCCG CTATAAAGCC CCCGAACTCC ACGCTGCGGC TGAATTAGGC GGCAATGCCG AAGATTATCT GGTGCTGTTC AAAGCCGTCT ATAGTGAGCA CTCTATGCAG TTGAATTTTA TTATCCACCG GGATGATTTA GCCTTAGGAA AATTCGACCG CATTTACTGC ATTTATGACA ACTAG
|
Protein sequence | MQFIAQLNCS DLKAFQSYLP REGRLLFFLE RWRFSEMLRG HVYYVAEDQQ LKSGKAIAEL KFDDAVCANY EYEAAYQLQG IASIKMIAPD MINSDNPHLV RLAKDRLQAL PEPQQAMVLE ALAVVDDELA PEWQDQLKGY ELIQLNVHGF IPGQILTQSQ WANTDWQSSN LQALLVPEQP LPYYNGIACI NGHGDSRYKA PELHAAAELG GNAEDYLVLF KAVYSEHSMQ LNFIIHRDDL ALGKFDRIYC IYDN
|
| |