9 homologs were found in PanDaTox collection
for query gene Noca_2858 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_2858  hypothetical protein  100 
 
 
402 aa  772    Nocardioides sp. JS614  Bacteria  normal  0.505703  n/a   
 
 
-
 
NC_013093  Amir_1381  hypothetical protein  34.72 
 
 
410 aa  99.8  8e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.212369  n/a   
 
 
-
 
NC_013510  Tcur_3073  hypothetical protein  32.41 
 
 
426 aa  97.4  4e-19  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000435746  n/a   
 
 
-
 
NC_013131  Caci_6077  hypothetical protein  28.65 
 
 
444 aa  69.7  0.00000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.596344 
 
 
-
 
NC_008699  Noca_3123  hypothetical protein  28.7 
 
 
424 aa  63.2  0.000000008  Nocardioides sp. JS614  Bacteria  normal  0.27337  n/a   
 
 
-
 
NC_013947  Snas_5763  hypothetical protein  26.85 
 
 
475 aa  57  0.0000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2693  hypothetical protein  35.71 
 
 
252 aa  55.1  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3048  hypothetical protein  32.9 
 
 
462 aa  48.9  0.0002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2173  TPR repeat-containing protein  31.03 
 
 
421 aa  47.4  0.0005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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