14 homologs were found in PanDaTox collection
for query gene Nmag_1390 on replicon NC_013922
Organism: Natrialba magadii ATCC 43099



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013922  Nmag_1390  deoxyribonuclease/rho motif-related TRAM  100 
 
 
171 aa  347  5e-95  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_3330  deoxyribonuclease/rho motif-related TRAM  74.14 
 
 
174 aa  237  5e-62  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_1021  deoxyribonuclease/rho motif-related TRAM  60 
 
 
145 aa  192  2e-48  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.225066 
 
 
-
 
NC_013158  Huta_1622  deoxyribonuclease/rho motif-related TRAM  56.14 
 
 
157 aa  191  5e-48  Halorhabdus utahensis DSM 12940  Archaea  normal  0.547238  n/a   
 
 
-
 
NC_012029  Hlac_2542  deoxyribonuclease/rho motif-related TRAM  56.4 
 
 
166 aa  167  6e-41  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.430828 
 
 
-
 
NC_007644  Moth_1912  RNA methyltransferase  27.47 
 
 
473 aa  45.4  0.0003  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.000000000182205  normal 
 
 
-
 
NC_010718  Nther_0467  RNA methyltransferase, TrmA family  33.87 
 
 
454 aa  45.8  0.0003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1295  RNA methyltransferase, TrmA family  32.79 
 
 
436 aa  45.4  0.0004  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4614  cyclic nucleotide-binding protein  38.33 
 
 
134 aa  44.3  0.0009  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_009012  Cthe_1751  RNA methyltransferase  28.57 
 
 
453 aa  43.5  0.001  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00216476  n/a   
 
 
-
 
NC_009943  Dole_1585  RNA methyltransferase  38.81 
 
 
471 aa  43.5  0.002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.953972  n/a   
 
 
-
 
NC_013158  Huta_2908  deoxyribonuclease/rho motif-related TRAM  33.33 
 
 
132 aa  42.4  0.004  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_010525  Tneu_1667  deoxyribonuclease  41.38 
 
 
79 aa  40.8  0.01  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_012034  Athe_0455  RNA methyltransferase, TrmA family  31.15 
 
 
451 aa  40.8  0.01  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
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