Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0467 |
Symbol | |
ID | 6315530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 495086 |
End bp | 496450 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642642851 |
Product | RNA methyltransferase, TrmA family |
Protein accession | YP_001916651 |
Protein GI | 188585106 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGATA TTAGACCTGT GAAGAAGGAA GAAAAACTAA CTTTAACTAT ACATGACTTA AATCACCAGG GTGAAGGAGT AGGCAAGTAT AGGAATTTCG CAATTTTTGT TCCTTTTGCC TTACCTGGTG AAAAAGTTAG AATAACCATT ACAGAAGTTA AAAAAAATTA TGCCAGAGGC CAAGTCCTGC AACATCAAGA TCGCTCAAGC CAGCGAGTTA AGCCTCCTTG TCCGTTCTTT CAAGAATGTG GGGGATGTCA ATTACAACAC TTGTCTTATA AAGGTCAATT ACAGTACAAA GAAAATTTAG TAGCTAATCA GATGAAAAAG GTAGCTGGTT TAAAAAATCC ACGAGTTTTG CCTGCCATTG GAATGGAAAG TCCTTGGTAT TACAGAAATA AATTTCAGAT ACCAGTGAAA CCCATTGGTG GAAAACCAAG GCTTGGTTTA TTTCAAAAAA GAAGCCAAAA TTTAGTTGAA ATTGACCACT GCATGATTCA GAAGCATGGA AACAATGAAG TATTAGAAAA AATGCGTAAT TTAGTAGACA GCTACGAAAA AGAATTTTAT AACTGTGAGC TGAAACATAT TATTTCTAGG GTGGGAGACA AAACTGATCA AGTGCAATTG ACATTTGTAA CAGGATCCGA AAAAATTGAC AACAAACAAA TGATTCTAGA GCCACTAAAG AATGGTATGG CTAACTTAGT CGGGATAGTA CAGAATATTA ATAAGAAACC AAGAGGAAAC GTCTTAGGCG ATAGATTTAA GACCCTATGG GGTCGAGAGT ATTTGATGGA TAATTTGCTT GATAAAAAAT TTCGTGTATC TGCTGGTGCT TTTTATCAGG TTAATCCCAG TCAAACAGAA GTACTCTATC AAAAAGTTTT TGAATTATGT AAACTCAAAG GTGTAGAGAA TGTAATGGAT ATTTATTGTG GCATTGGAAC CATCTCTTTA CTTGCTGCTG AAAATGCAAG TAAGGTGGTG GGTATAGAGA TAGCAGAGGA AGCAGTAAAG GATGCTAATA TTAATAAGAA TATCAATGGA CAAGAGAATG CCTGGTTTTA TCAGGCACGG GCGGAAGATG AAAAAACTGA ATCCATAATT CAGGATTATT CGCCTGAAAT TGTGATTATG GACCCACCTA GAAAAGGATG TGATGAAAAT CTGTTAACAA GCTTAGATTG GATCAGACCT GAAAAGATAG CTTACGTTTC CTGTAACCCA GCTACTCTAG CTAGGGATGT AGGAAAATTG ATTGAGTTTG GTTATTATCC GGAATTATTT CAACCAGTTG ATATGTTTCC ACAAACCACT CATATAGAAG TGATTTGTAT CCTAACTAAG ATAGATTATC TATAA
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Protein sequence | MPDIRPVKKE EKLTLTIHDL NHQGEGVGKY RNFAIFVPFA LPGEKVRITI TEVKKNYARG QVLQHQDRSS QRVKPPCPFF QECGGCQLQH LSYKGQLQYK ENLVANQMKK VAGLKNPRVL PAIGMESPWY YRNKFQIPVK PIGGKPRLGL FQKRSQNLVE IDHCMIQKHG NNEVLEKMRN LVDSYEKEFY NCELKHIISR VGDKTDQVQL TFVTGSEKID NKQMILEPLK NGMANLVGIV QNINKKPRGN VLGDRFKTLW GREYLMDNLL DKKFRVSAGA FYQVNPSQTE VLYQKVFELC KLKGVENVMD IYCGIGTISL LAAENASKVV GIEIAEEAVK DANINKNING QENAWFYQAR AEDEKTESII QDYSPEIVIM DPPRKGCDEN LLTSLDWIRP EKIAYVSCNP ATLARDVGKL IEFGYYPELF QPVDMFPQTT HIEVICILTK IDYL
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