9 homologs were found in PanDaTox collection
for query gene Nham_0732 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_0732  putative general secretion pathway protein N  100 
 
 
228 aa  442  1e-123  Nitrobacter hamburgensis X14  Bacteria  normal  0.556314  n/a   
 
 
-
 
NC_009485  BBta_1287  putative general secretion pathway protein N, GspN  54.62 
 
 
174 aa  111  7.000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.371415  normal 
 
 
-
 
NC_009485  BBta_2621  hypothetical protein  52.14 
 
 
225 aa  96.3  3e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2998  hypothetical protein  46.67 
 
 
237 aa  92.4  5e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0516943 
 
 
-
 
NC_009720  Xaut_2116  hypothetical protein  42.25 
 
 
225 aa  90.1  2e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  0.215594  normal 
 
 
-
 
NC_011666  Msil_3888  hypothetical protein  40.88 
 
 
201 aa  78.6  0.00000000000009  Methylocella silvestris BL2  Bacteria  n/a    normal  0.520868 
 
 
-
 
NC_011666  Msil_0919  hypothetical protein  37.4 
 
 
244 aa  60.5  0.00000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.338612 
 
 
-
 
NC_011666  Msil_1296  hypothetical protein  35 
 
 
103 aa  56.2  0.0000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_1308  hypothetical protein  33 
 
 
222 aa  47  0.0002  Delftia acidovorans SPH-1  Bacteria  normal  0.268206  normal  0.0527555 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>