59 homologs were found in PanDaTox collection
for query gene Ndas_3923 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014210  Ndas_3923  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  100 
 
 		 235 aa  468  1.0000000000000001e-131  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2453  succinate dehydrogenase subunit C  67.78 
 
 		 238 aa  307  1.0000000000000001e-82  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1710  succinate dehydrogenase/fumarate reductase cytochrome b subunit  51.14 
 
 		 227 aa  215  5.9999999999999996e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0407721  normal  0.47892 
 
 
-
 
NC_013757  Gobs_1054  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  47.44 
 
 		 231 aa  213  9.999999999999999e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1707  succinate dehydrogenase/fumarate reductase cytochrome b subunit  52.05 
 
 		 230 aa  207  1e-52  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00155149 
 
 
-
 
NC_013510  Tcur_1123  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  49.1 
 
 		 232 aa  204  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8458  succinate dehydrogenase, cytochrome b subunit  47.66 
 
 		 253 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.70376  normal  1 
 
 
-
 
NC_013169  Ksed_23340  succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family  45.53 
 
 		 231 aa  201  9.999999999999999e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3551  succinate dehydrogenase subunit C  42.44 
 
 		 233 aa  192  4e-48  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1278  succinate dehydrogenase/fumarate reductase cytochrome b subunit  46.85 
 
 		 234 aa  191  6e-48  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.563199 
 
 
-
 
NC_007777  Francci3_3465  succinate dehydrogenase subunit C  44.59 
 
 		 246 aa  189  4e-47  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0384  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  40.17 
 
 		 234 aa  178  4.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556008  normal  0.820054 
 
 
-
 
NC_013947  Snas_5226  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  44.54 
 
 		 232 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.659041  normal  1 
 
 
-
 
NC_011831  Cagg_1576  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  42.49 
 
 		 239 aa  171  6.999999999999999e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.790909  normal  1 
 
 
-
 
NC_009767  Rcas_3079  succinate dehydrogenase/fumarate reductase cytochrome b subunit  42.41 
 
 		 226 aa  167  2e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5262  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  38.26 
 
 		 256 aa  148  8e-35  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_009523  RoseRS_2400  succinate dehydrogenase/fumarate reductase cytochrome b subunit  42.41 
 
 		 226 aa  146  2.0000000000000003e-34  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1734  succinate dehydrogenase/fumarate reductase cytochrome b subunit  39.82 
 
 		 223 aa  140  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.776584  n/a   
 
 
-
 
NC_009675  Anae109_2602  succinate dehydrogenase/fumarate reductase cytochrome b subunit  38.01 
 
 		 230 aa  136  2e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_1918  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  41.33 
 
 		 248 aa  126  4.0000000000000003e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.48387  normal  1 
 
 
-
 
NC_010571  Oter_0671  succinate dehydrogenase/fumarate reductase cytochrome b subunit  36.33 
 
 		 253 aa  117  9.999999999999999e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_2636  succinate dehydrogenase subunit C  34.36 
 
 		 232 aa  115  6e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.189962  n/a   
 
 
-
 
NC_011145  AnaeK_2722  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.39 
 
 		 221 aa  114  2.0000000000000002e-24  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2817  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.84 
 
 		 221 aa  113  3e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.893711  n/a   
 
 
-
 
NC_007498  Pcar_0446  succinate dehydrogenase/fumarate reductase, cytochrome b subunit  33.04 
 
 		 223 aa  107  1e-22  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000043641  n/a   
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  30.04 
 
 		 219 aa  102  4e-21  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_010655  Amuc_0986  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.04 
 
 		 233 aa  99.4  5e-20  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.190764  normal  0.959903 
 
 
-
 
NC_011146  Gbem_3334  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.6 
 
 		 221 aa  99  6e-20  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000562871  n/a   
 
 
-
 
NC_009943  Dole_1555  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.28 
 
 		 212 aa  97.8  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_2934  succinate dehydrogenase subunit C  30.67 
 
 		 221 aa  97.4  2e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3127  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.78 
 
 		 221 aa  95.5  7e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3020  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.78 
 
 		 221 aa  95.5  7e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.197929  n/a   
 
 
-
 
NC_012918  GM21_0912  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.03 
 
 		 221 aa  94.4  1e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  8.63584e-33 
 
 
-
 
NC_013440  Hoch_5881  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.02 
 
 		 228 aa  93.2  3e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0369538  normal  1 
 
 
-
 
NC_010814  Glov_2214  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.86 
 
 		 222 aa  89.7  3e-17  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000205713  n/a   
 
 
-
 
NC_002939  GSU1176  fumarate reductase, cytochrome b subunit, putative  29.13 
 
 		 220 aa  89  6e-17  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000804206  n/a   
 
 
-
 
NC_007517  Gmet_2397  succinate dehydrogenase subunit C  29.87 
 
 		 220 aa  87  2e-16  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000157614  normal  1 
 
 
-
 
NC_011060  Ppha_2853  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.36 
 
 		 220 aa  84  0.000000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2483  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.23 
 
 		 221 aa  83.2  0.000000000000004  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000324383  n/a   
 
 
-
 
NC_010803  Clim_2443  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.49 
 
 		 231 aa  77.4  0.0000000000002  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_3969  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.65 
 
 		 223 aa  77  0.0000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.539858  normal  0.938313 
 
 
-
 
NC_013061  Phep_3265  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.83 
 
 		 224 aa  75.5  0.0000000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0102296  normal  0.074852 
 
 
-
 
NC_008639  Cpha266_0102  succinate dehydrogenase subunit C  24.89 
 
 		 242 aa  74.3  0.000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_2472  succinate dehydrogenase subunit C  27.27 
 
 		 234 aa  71.6  0.00000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.088296 
 
 
-
 
NC_007512  Plut_2082  succinate dehydrogenase, cytochrome b558 subunit  29.46 
 
 		 217 aa  67.4  0.0000000002  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_6536  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.53 
 
 		 229 aa  67.4  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0147302  normal  0.421545 
 
 
-
 
NC_013730  Slin_5011  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.56 
 
 		 231 aa  65.9  0.0000000006  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013162  Coch_0242  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.68 
 
 		 224 aa  62.8  0.000000005  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.463951  n/a   
 
 
-
 
NC_002950  PG1616  hypothetical protein  30.53 
 
 		 230 aa  60.8  0.00000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_014148  Plim_2451  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  26.7 
 
 		 263 aa  58.2  0.0000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.260267  n/a   
 
 
-
 
NC_007514  Cag_1935  succinate dehydrogenase, cytochrome b558 subunit  27.61 
 
 		 221 aa  58.2  0.0000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_0210  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28 
 
 		 209 aa  56.6  0.0000003  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.178557 
 
 
-
 
NC_014230  CA2559_04700  Succinate dehydrogenase, cytochrome b558 subunit  25.23 
 
 		 239 aa  55.8  0.0000006  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.142799  n/a   
 
 
-
 
NC_007604  Synpcc7942_0314  succinate dehydrogenase subunit C  27.36 
 
 		 209 aa  52  0.000009  Synechococcus elongatus PCC 7942  Bacteria  normal  0.884437  normal  1 
 
 
-
 
NC_009441  Fjoh_0677  succinate dehydrogenase/fumarate reductase cytochrome b subunit  26.73 
 
 		 221 aa  50.1  0.00003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.330554  n/a   
 
 
-
 
NC_009632  SaurJH1_1228  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.03 
 
 		 204 aa  49.3  0.00005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1206  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.03 
 
 		 204 aa  49.3  0.00005  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP0730  succinate dehydrogenase, cytochrome b558 subunit  28.19 
 
 		 204 aa  47.8  0.0001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.545164  n/a   
 
 
-
 
NC_008820  P9303_01681  succinate dehydrogenase  28.5 
 
 		 210 aa  43.9  0.002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
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