57 homologs were found in PanDaTox collection
for query gene Gobs_1054 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013757  Gobs_1054  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  100 
 
 		 231 aa  463  1e-129  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8458  succinate dehydrogenase, cytochrome b subunit  52.29 
 
 		 253 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.70376  normal  1 
 
 
-
 
NC_009380  Strop_1710  succinate dehydrogenase/fumarate reductase cytochrome b subunit  49.31 
 
 		 227 aa  205  6e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0407721  normal  0.47892 
 
 
-
 
NC_013510  Tcur_1123  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  45.69 
 
 		 232 aa  202  5e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3465  succinate dehydrogenase subunit C  46.3 
 
 		 246 aa  199  1.9999999999999998e-50  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3923  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  45.73 
 
 		 235 aa  198  5e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2453  succinate dehydrogenase subunit C  43.72 
 
 		 238 aa  198  7e-50  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1707  succinate dehydrogenase/fumarate reductase cytochrome b subunit  49.31 
 
 		 230 aa  197  1.0000000000000001e-49  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00155149 
 
 
-
 
NC_013131  Caci_0384  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  44.05 
 
 		 234 aa  194  9e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556008  normal  0.820054 
 
 
-
 
NC_009921  Franean1_1278  succinate dehydrogenase/fumarate reductase cytochrome b subunit  47.91 
 
 		 234 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.563199 
 
 
-
 
NC_008699  Noca_3551  succinate dehydrogenase subunit C  40.45 
 
 		 233 aa  187  1e-46  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_2602  succinate dehydrogenase/fumarate reductase cytochrome b subunit  45.62 
 
 		 230 aa  179  4e-44  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013169  Ksed_23340  succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family  39.01 
 
 		 231 aa  177  1e-43  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3079  succinate dehydrogenase/fumarate reductase cytochrome b subunit  43.98 
 
 		 226 aa  176  3e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5226  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  41.2 
 
 		 232 aa  166  2.9999999999999998e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.659041  normal  1 
 
 
-
 
NC_011831  Cagg_1576  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  38.96 
 
 		 239 aa  164  8e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.790909  normal  1 
 
 
-
 
NC_009523  RoseRS_2400  succinate dehydrogenase/fumarate reductase cytochrome b subunit  43.98 
 
 		 226 aa  163  2.0000000000000002e-39  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1734  succinate dehydrogenase/fumarate reductase cytochrome b subunit  39.45 
 
 		 223 aa  154  1e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.776584  n/a   
 
 
-
 
NC_007760  Adeh_2636  succinate dehydrogenase subunit C  37.18 
 
 		 232 aa  153  2e-36  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.189962  n/a   
 
 
-
 
NC_011891  A2cp1_2817  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  39.56 
 
 		 221 aa  153  2.9999999999999998e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.893711  n/a   
 
 
-
 
NC_011145  AnaeK_2722  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  39.81 
 
 		 221 aa  153  2.9999999999999998e-36  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5262  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.55 
 
 		 256 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_014151  Cfla_1918  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  35.8 
 
 		 248 aa  125  5e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.48387  normal  1 
 
 
-
 
NC_010571  Oter_0671  succinate dehydrogenase/fumarate reductase cytochrome b subunit  33.47 
 
 		 253 aa  124  1e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010655  Amuc_0986  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.92 
 
 		 233 aa  123  3e-27  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.190764  normal  0.959903 
 
 
-
 
NC_010814  Glov_2214  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.08 
 
 		 222 aa  122  7e-27  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000205713  n/a   
 
 
-
 
NC_011146  Gbem_3334  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.04 
 
 		 221 aa  117  9.999999999999999e-26  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000562871  n/a   
 
 
-
 
NC_011145  AnaeK_3020  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  32.59 
 
 		 221 aa  116  3e-25  Anaeromyxobacter sp. K  Bacteria  normal  0.197929  n/a   
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.36 
 
 		 219 aa  116  3e-25  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_011891  A2cp1_3127  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  32.59 
 
 		 221 aa  116  3e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0912  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.72 
 
 		 221 aa  115  3.9999999999999997e-25  Geobacter sp. M21  Bacteria  n/a    hitchhiker  8.63584e-33 
 
 
-
 
NC_007760  Adeh_2934  succinate dehydrogenase subunit C  32.59 
 
 		 221 aa  115  3.9999999999999997e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_5881  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.12 
 
 		 228 aa  103  2e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0369538  normal  1 
 
 
-
 
NC_008609  Ppro_2483  succinate dehydrogenase/fumarate reductase cytochrome b subunit  30.49 
 
 		 221 aa  101  1e-20  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000324383  n/a   
 
 
-
 
NC_002939  GSU1176  fumarate reductase, cytochrome b subunit, putative  30.94 
 
 		 220 aa  97.4  2e-19  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000804206  n/a   
 
 
-
 
NC_007517  Gmet_2397  succinate dehydrogenase subunit C  29.6 
 
 		 220 aa  96.7  3e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000157614  normal  1 
 
 
-
 
NC_007498  Pcar_0446  succinate dehydrogenase/fumarate reductase, cytochrome b subunit  28.64 
 
 		 223 aa  95.9  5e-19  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000043641  n/a   
 
 
-
 
NC_009943  Dole_1555  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.88 
 
 		 212 aa  93.6  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_2451  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.7 
 
 		 263 aa  92  6e-18  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.260267  n/a   
 
 
-
 
NC_013162  Coch_0242  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.37 
 
 		 224 aa  91.7  1e-17  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.463951  n/a   
 
 
-
 
NC_008639  Cpha266_0102  succinate dehydrogenase subunit C  29 
 
 		 242 aa  90.1  2e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_2472  succinate dehydrogenase subunit C  29 
 
 		 234 aa  90.9  2e-17  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.088296 
 
 
-
 
NC_011060  Ppha_2853  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.85 
 
 		 220 aa  87.4  2e-16  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_2443  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.41 
 
 		 231 aa  85.5  6e-16  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_2082  succinate dehydrogenase, cytochrome b558 subunit  28.18 
 
 		 217 aa  83.6  0.000000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5011  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.83 
 
 		 231 aa  79.3  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_3969  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.28 
 
 		 223 aa  78.2  0.0000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.539858  normal  0.938313 
 
 
-
 
NC_009441  Fjoh_0677  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.03 
 
 		 221 aa  73.6  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.330554  n/a   
 
 
-
 
NC_002950  PG1616  hypothetical protein  28.18 
 
 		 230 aa  73.2  0.000000000003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_013132  Cpin_6536  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.83 
 
 		 229 aa  72.8  0.000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0147302  normal  0.421545 
 
 
-
 
NC_007514  Cag_1935  succinate dehydrogenase, cytochrome b558 subunit  30.12 
 
 		 221 aa  72.8  0.000000000004  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_3265  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  24.07 
 
 		 224 aa  71.6  0.00000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0102296  normal  0.074852 
 
 
-
 
NC_014230  CA2559_04700  Succinate dehydrogenase, cytochrome b558 subunit  26.05 
 
 		 239 aa  70.5  0.00000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.142799  n/a   
 
 
-
 
NC_013061  Phep_0210  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.93 
 
 		 209 aa  62.8  0.000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.178557 
 
 
-
 
NC_007513  Syncc9902_0586  succinate dehydrogenase cytochrome b-556 subunit  27.03 
 
 		 208 aa  47.8  0.0002  Synechococcus sp. CC9902  Bacteria  normal  0.59811  n/a   
 
 
-
 
NC_007604  Synpcc7942_0314  succinate dehydrogenase subunit C  25.68 
 
 		 209 aa  45.8  0.0005  Synechococcus elongatus PCC 7942  Bacteria  normal  0.884437  normal  1 
 
 
-
 
NC_007516  Syncc9605_2086  succinate dehydrogenase subunit C  22.86 
 
 		 208 aa  42  0.007  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
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