6 homologs were found in PanDaTox collection
for query gene Mpop_3977 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_3977  hypothetical protein  100 
 
 
448 aa  919    Methylobacterium populi BJ001  Bacteria  normal  0.025331  normal  0.249589 
 
 
-
 
NC_012669  Bcav_1202  LicD family protein  36.02 
 
 
427 aa  129  9.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.673451  normal  0.966221 
 
 
-
 
NC_008228  Patl_3212  coagulation factor 5/8 type-like  25.76 
 
 
425 aa  105  1e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1451  methyltransferase type 11  26.11 
 
 
523 aa  56.6  0.0000008  Nocardioides sp. JS614  Bacteria  normal  0.182574  n/a   
 
 
-
 
NC_008228  Patl_3213  hypothetical protein  27.98 
 
 
651 aa  46.6  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1495  LicD family protein  28.37 
 
 
454 aa  43.9  0.006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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